Camponotus floridanus (Florida carpenter ant): 105259576
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Entry
105259576 CDS
T03919
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105259576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105259576
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105259576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105259576
NCBI-ProteinID:
XP_011269898
UniProt:
E2A2H2
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDLQYKTIHPVKYLQDHLEQGIRPDGRKFLSFRPVSVNVSSIVQADSSAIFKLGDTSAVC
GIKAELATPKADIPDHGYIVPNVELSPLCSPKFRPGPPSEQAQVLSKLIDIVLSNSRALD
LKDLCICKNKLVWVLYCDILCLNYNGSVIDACIGAMIAALKTLTLPEINYNSETGVIVTH
PENRKAFTVRTLPVSASFAIFEKQLLLVDPSDDEEDMSSTRFSIVMDDEEEICYIHKPGG
IPISQNLLCKGLEMTKVRAKSIRSVINAAISTLNVNNIETNSPK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaatataagacaattcatcctgtaaaatatttacaagatcaccttgaacaa
ggtattcgaccagatggtagaaaatttttatcatttaggccagtaagtgtaaatgtttca
tcgattgttcaagcagatagttcagcaatattcaagttgggtgatacaagtgcagtctgt
ggcattaaagctgaattagcgacgccaaaagcagatattccagatcatggatatatagta
ccaaatgtagaattatctcctttatgttctccaaagtttcgtccaggcccaccaagtgaa
caagcacaagtgctttctaaattgatagatattgtattaagtaattcaagagcacttgat
ttaaaagatctttgcatctgcaaaaataaattagtatgggtcttgtactgtgatatttta
tgtctaaattacaatggctcagttatagatgcttgtatcggagcaatgattgcagctctt
aaaacattgactctaccagaaataaactacaacagtgaaacaggagtaattgttacacat
ccagaaaatagaaaggcatttactgtaagaacacttccagtttctgcatcgtttgcaata
tttgagaaacaactattgctagttgatccttcagatgatgaagaagacatgtcatctaca
agattttcaattgtaatggatgatgaagaagaaatttgttatatacataaacctggtgga
attcctatttctcagaatttactttgtaaaggactagaaatgacgaaagtgagagcaaaa
tcaatcagatccgtaattaatgctgcaatctcgacactaaatgtgaacaatatagaaaca
aattcacctaaataa
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