Camponotus floridanus (Florida carpenter ant): 109609734
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Entry
109609734 CDS
T03919
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109609734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
109609734
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109609734
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109609734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
109609734
NCBI-ProteinID:
XP_019885640
LinkDB
All DBs
Position
Unknown
AA seq
202 aa
AA seq
DB search
MNEQEELIVCVPGQRLCVSDKVNIAGPGTYEQQGYIYSKLAGIVKLITNEKQTRTIEVQG
ITEQSIVPAPGDIVTAIVTLVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRAIDKDRLE
MYKCYRPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEGVAMVPINWTQMQCPKSL
CKEFRKVAKVVPEHVAAEHIEQ
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacaagaggaacttatcgtttgtgtgccgggtcaaagattatgtgtatctgac
aaagttaatatagccggacctggaacatacgagcagcaagggtatatttattcaaagctt
gctggcattgtaaaattaataacaaatgaaaaacagactcgtacaatagaggtacagggt
ataacagaacaaagtatcgttcctgcaccgggggatattgtgacagctatagttacatta
gttaatcagagattttgtaagtgtagcatcaagtgtgtaggtgatatagtattgacgaga
ccttacagagggatattaagaaaagaagatgttcgagcaattgacaaagatagattagaa
atgtacaaatgctatcgacctggggatattattcttgcaagagttatgcctatgacagaa
gcacatacttatcaattgagtactgcggaaaatgagctaggagttgtaatagcacatagt
gaagaaggtgtagctatggtaccaatcaactggacacaaatgcaatgtccaaaatctttg
tgcaaggaattccgaaaagtagctaaggttgtgccagaacatgttgcggcagagcatatt
gaacaatga
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