KEGG   Chitinibacter fontanus: HZU75_04875
Entry
HZU75_04875       CDS       T06720                                 
Name
(GenBank) Rne/Rng family ribonuclease
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
cfon  Chitinibacter fontanus
Pathway
cfon03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HZU75_04875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfon03019]
    HZU75_04875
   03009 Ribosome biogenesis [BR:cfon03009]
    HZU75_04875
Enzymes [BR:cfon01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     HZU75_04875
Messenger RNA biogenesis [BR:cfon03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HZU75_04875
Ribosome biogenesis [BR:cfon03009]
 Prokaryotic type
  rRNA processing factors
   HZU75_04875
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: QLI80912
UniProt: A0A7D5V950
LinkDB
Position
1027548..1030505
AA seq 985 aa
MKRMLFNATQAEELRVAIVDGQKLIDLDIETVGKEQRKSNIYKGIITRIEPSLEACFVDY
GCDRHGFLPFKEIARSYLAEGDGGRGRIADSLKEGQQLIVQVEKDERGNKGAALTTYISL
AGRYLVLMPNNPRGGGVSRRIEGEERNELRAAMDQLETPNGMSLIARTAAIGRNAEELQW
DLGYLLQLWRAIEGAANTQTGAFLIYQESSLVIRAIRDYFQPDIGELLIDKRDIYEQAQQ
FMSHVMPNNVHKVKFYQDDVPLFSRFQIEHQIETAYSREVSLPSGGAIVLDRTEALWSID
VNSAKATRGGDIEETALRTNLEAADEIARQMRLRDVGGLIVIDFIDMENPKNQRDVENRV
REALHHDRARVQTGKISRFGLMELSRQRLQPSLEETSHIACPRCHGTGFIRGIESSALHI
LRIIQEEAMKENTGALHAQVPVDVATFLLNEKRAELFAVEARLKVGVMLIPNMHLETPNY
SITRVRSEDVLPFEDALPSYRMVEQPAEEGYKPGKGKEEQAKRQEAAVKGITPAQPAPAS
TERVAKPELKAAQPSLWKKIVAWFSSEPEEKKPVEEVKPAPRQPRGRNERRNGRFDRNEN
REGREGQAPRERAERSERGEKAERPERNNRSSKPRIEEDIQKREERQQRPSRGERQPREE
RQRQEVRAEQAQELLVATASEAAVTVEANNAAESNGETRNRRRRSRRDRRDRNDRNPAVA
EITASADEVSTPAFVPNEVILEQQAQQAAAATIESAVTTSADAIAETAAIAEVTEAAIPT
PATTAVAPEIATTNSNNTTAHATLADAASVQAEVAAENGSAEATQADSVEVAPTAENITA
VEAATPTQAVIAEATPVVAAISEEVQIAVQAVVVDTVKAEFVVASPAEVGLTQVATRGDT
PAAATPVIEPVLPQRRRRKDVQTNAADTPVADEPLQLVETRNSIAASEPIVVAPSTTRRR
RKDVLANSTGEQNAASPLAQVETKQ
NT seq 2958 nt   +upstreamnt  +downstreamnt
atgaagcgtatgctttttaatgcaactcaagccgaagagttgcgcgttgcgatcgttgat
ggccaaaaactcatcgacctcgatatcgaaaccgtcggcaaagaacagcgcaaatccaac
atctacaagggcatcattacccgcattgagcctagccttgaagcgtgttttgttgactat
ggctgtgaccgccatggcttcttgccattcaaagaaatcgcccgctcctacctcgccgaa
ggcgacggcggccgtggccgcatcgcggatagcctgaaagaaggccagcagctgatcgtt
caagtggaaaaagacgaacgcggcaataaaggcgcggccctcaccacttacatcagccta
gctggtcgttatttggtcttgatgcccaacaacccacgtggcggcggtgtttcgcgtcgc
atcgaaggcgaagagcgcaatgaattgcgcgccgcgatggaccaactggaaacgcctaac
ggcatgagcctgatcgcgcgtaccgcagcgattggccgcaacgccgaagaattgcagtgg
gacctggggtatctgctgcaactctggcgcgcaattgaaggtgcagccaatacccagacc
ggcgccttcctgatttaccaagaatctagcctcgttatccgtgcgattcgcgattacttc
cagccggatatcggcgagttgctgatcgacaaacgcgatatctacgagcaagcacagcag
tttatgagccacgttatgcctaacaatgtgcataaagtgaagttctaccaagacgacgtg
ccgctgttctcacgtttccagattgaacaccaaatcgaaaccgcctactcacgtgaagtg
agcttaccatcgggcggcgcaattgttctcgatcgtaccgaagcgctatggtcaatcgac
gtaaactcggccaaagccacgcgcggcggcgatatcgaagaaaccgcattgcgtaccaat
ctggaagctgcggacgaaatcgcgcgccagatgcgtttacgcgacgtgggtggtttgatc
gtgatcgattttatcgacatggaaaacccgaaaaaccaacgcgatgttgaaaaccgcgtt
cgcgaagccttgcatcacgaccgcgctcgcgtgcaaaccggcaaaatcagccgctttggt
ttgatggagttgtctcgccagcgcctgcaaccgtcgctcgaagaaaccagccatattgcc
tgcccacgctgtcatggcaccggctttatccgcggcatcgaatcatcagcattgcatatc
ctgcgcatcattcaggaagaagcaatgaaagaaaacactggcgcattgcacgcgcaagta
ccagtggatgtggcgaccttcttgctcaacgaaaaacgcgctgagttgttcgctgttgaa
gcgcgcctgaaagtgggcgtgatgttgattccaaatatgcatttggaaacaccaaactac
agtattactcgtgttcgttcggaagacgtactgccatttgaagatgcactaccgtcttac
cgcatggtcgagcagcctgccgaggaaggttacaaaccaggcaaaggcaaagaagaacaa
gccaaacgccaggaagctgccgtgaaaggcattacgccagctcaaccagcgccggccagc
actgaacgcgtcgccaaacccgagcttaaagcagcacagccttcgctgtggaagaaaatt
gttgcttggtttagcagcgagccggaagagaaaaaaccggtcgaagaagtcaagcctgca
ccgcgtcagccacgtggtcgcaacgagcgccgcaatggccgttttgatcgcaacgagaat
cgcgagggacgggaaggtcaagctccacgcgagcgtgcagaacgcagcgaacgcggtgaa
aaagctgagcgcccggagcgcaacaaccgttctagcaaaccgcgcatcgaggaagacatc
cagaaacgcgaagaacgtcagcagcgcccaagccgtggcgaacgtcaaccacgtgaagag
cgccaacgccaagaagtacgtgcagaacaagcgcaagagttgctggtagcaacggcaagc
gaagctgctgtgacggttgaagcaaacaatgcagcagagagcaatggcgagacacgcaat
cgccgccgtcgtagccgtcgtgatcgtcgtgaccgcaatgatcgcaaccctgcggttgca
gaaatcacagcgagcgcagatgaagtaagcaccccagcatttgtgcctaatgaggtgatt
ctagagcaacaggctcaacaagctgcggctgccacaatcgagtcggcggtgacaacttca
gcagatgccatagctgaaacggctgcgatcgctgaagtcactgaagctgccatcccaact
ccggcgaccactgcagtggctccagaaattgcaacgacgaacagcaacaacacgacagcg
cacgcaactctagccgacgcagcaagcgtgcaagctgaagtagcagcagaaaacggctcg
gcagaagccacacaagcagacagtgttgaagtagctccgactgcagagaacattactgcg
gtcgaggctgcgactccaacccaagccgtaattgctgaagctacgccagtagtagccgcc
attagcgaagaagtgcaaattgcggtgcaggctgtggttgtagacaccgtaaaagcggag
tttgtcgtggctagcccagctgaagttggcttaacccaagtggccacccgcggcgataca
cctgcggcagctaccccagtgattgagccggtactgcctcaacgtcgtcgccgcaaagat
gtgcaaaccaatgctgcggatactcctgtagcagacgagccactgcaattggttgaaact
cgtaacagcattgcagcaagcgagcctatcgtcgttgcaccaagcacgacccgccgtcgc
cgtaaagatgtactggcaaatagcactggcgagcaaaatgcagcaagcccactcgcgcaa
gttgaaaccaaacagtaa

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