Chitinibacter fontanus: HZU75_05030
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Entry
HZU75_05030 CDS
T06720
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
cfon
Chitinibacter fontanus
Pathway
cfon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HZU75_05030 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfon03400
]
HZU75_05030 (sbcB)
Enzymes [BR:
cfon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
HZU75_05030 (sbcB)
DNA repair and recombination proteins [BR:
cfon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HZU75_05030 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HZU75_05030 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HZU75_05030 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
FTH
Motif
Other DBs
NCBI-ProteinID:
QLI80937
UniProt:
A0A7D5V8J1
LinkDB
All DBs
Position
1060885..1062321
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AA seq
478 aa
AA seq
DB search
MSITFLWHDYETFGVNPKLDRPAQFAGIRTDADLNEIGQPINLHCQPANDYLPAPEACLL
TGITPQFCLANGIPEYQFAAAIERELATPETIGVGYNTIRFDDEVTRFMFWRNLIDPYAR
EWQNGCGRWDLLDVVRTLYALRPEGIEWPKHDDGRISFKLEHLTAANGLAHEAAHDALSD
VRATVALARLIRAKQPKLFDFCLALRKKDRVFDEMNIAQPRPLVHISGMYGVERGNLALV
WPLGMHPTNKNEIIVWDLAYDPQELFGLTPAEIRHRMFSKQSELGDTPRLPIKTIHANKS
PIVVGNLKVLRSEDIARWHIDMNQIQQHAALLTQAPSIAWHEVFARERDHNDEKPDVDGN
LYGGFVSNTDRRTLTRLRSLNGAQLATEIVHFEDRQLEELFFRYRARNFPETLTAEEDTR
WEQWRNARLFEGAANALTLESYSEEIDRLAETLADGDARGEEILAALYDYAEQIAPEF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcataacttttctctggcacgactacgaaacttttggcgtaaaccccaagctagat
cgcccggcgcaatttgccgggattcgcaccgatgccgatctcaatgaaatcgggcagcca
attaatttacactgccaacctgccaatgattatctgccagcgcccgaggcatgcctactc
actggaattactccgcaattttgtttggccaacgggattccagaatatcaatttgccgcc
gccatcgaacgcgaactagccacacccgaaacaataggcgtgggttacaacaccatccgt
tttgacgatgaagtgactcgctttatgttttggcgcaatctgatcgatccttatgcacgc
gaatggcaaaacggctgcggccgctgggatttgctcgatgttgtacgcaccctgtatgca
ctcagaccggaagggattgaatggcccaaacatgacgatgggcgtatcagctttaaattg
gagcacctgaccgcagccaatggcttggcgcatgaggccgcccacgacgcattatcggat
gtcagagcaaccgttgcgctggcgcgattaattcgcgccaaacaaccaaaattattcgac
ttttgcttggccttgcgtaaaaaagaccgggtctttgacgaaatgaacatcgcgcaaccc
cgccccttggtgcatatttccggcatgtatggcgtagagcgcggaaacctagcgctggtt
tggccactgggtatgcaccccaccaataaaaatgaaattattgtctgggatttggcctac
gatccgcaggagctgtttggcctgactcccgccgaaattcgccaccggatgtttagcaaa
caaagcgaattgggtgatacgccgcggctaccaatcaaaaccatacacgcgaacaaatcc
ccgatcgtggtgggcaacttaaaagtgctgcgcagtgaagacatcgcacgctggcacatt
gatatgaaccagatccagcagcatgcagccctacttacccaagcccccagtattgcgtgg
catgaagtgtttgctcgtgaacgtgaccacaacgacgagaaacctgatgtcgatggcaac
ctatatggcggctttgtctccaacactgatcgacgcaccctcacccgcctgcgcagcctg
aatggcgcgcagctggctaccgaaatagtgcactttgaagaccgccagctggaagaatta
tttttccgctaccgagcccgcaacttcccagaaacactcacagccgaggaagatactcgc
tgggagcagtggcggaatgcacgactatttgaaggcgcagccaacgcactcactttagaa
agttatagcgaggaaattgatcgtttagccgaaacgcttgccgatggggatgcgcgcggc
gaggaaattttagcggcgctctacgattatgccgagcaaatagcgccagaattttga
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