Chitinibacter fontanus: HZU75_10375
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Entry
HZU75_10375 CDS
T06720
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cfon
Chitinibacter fontanus
Pathway
cfon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HZU75_10375 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfon03021
]
HZU75_10375 (rpoC)
03400 DNA repair and recombination proteins [BR:
cfon03400
]
HZU75_10375 (rpoC)
Enzymes [BR:
cfon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HZU75_10375 (rpoC)
Transcription machinery [BR:
cfon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HZU75_10375 (rpoC)
DNA repair and recombination proteins [BR:
cfon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HZU75_10375 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QLI81909
UniProt:
A0A7D5ZHC8
LinkDB
All DBs
Position
2199619..2203842
Genome browser
AA seq
1407 aa
AA seq
DB search
MKGLLELFKQVAQDEEFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDIALRDIERVLYFEAFIVIEPGMTPLQRGQLLTEEDYFSKVEEYGDEFVAMM
GAEAVRELLKSMDVDQEISRLRAELDSTGSETKIKKIAKRLKVLEAFERSGIKPEWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELRAPEIIVRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKLMALELFKPFIFHKLEVMGLATTIKAAKKMVESQEPVVWDILEDVIREHP
VLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLAPANGEPIIVPSQDIVLGLYYMTREAKYAKGERLNDDGQRLTIFSNVSE
ALRAYANKDVTLQTRVSIRLKEWFKNESGEWESKMVRRDTTVGRAILSEILPKGLDFSHI
DKSLKKKEIGKLINASFRRCGLKDTVVFADQLMYTGFSYSTRGGISICVDDMLVPAKKVE
LLAAAQSEVKEIEQQYSSGLVTQGERYNKVVDIWGRAGDQIAKAMMDQLGKEPVLDANGK
QDEQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIEMPITTNFREGLTVLQY
FISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVIEDDCGTKNGVAMKAVVQGGDVV
EALRERILGRVVAKDVIDPSSQETLFEAGYLLNEDAVDEIELRGVDEVVVRTPLSCETRY
GLCAKCYGRDLGRGHLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAANQVEA
KSSGNIAYSSNMRYVTNAKGEPVVIARSAEVLILDDNGRERETHKVPYGATLTVKDGDVI
KAGTVLGTWDPHSRPIITEYSGTVKFENVEEGMTVVKQVDDVTGLSTLVVIASKAKVTSS
KGLRPLVKLIDEFGNEMKLAGTDTPVTISFQVGSIITVKDGQQVGVGDVLARIPQESAKT
RDITGGLPRVAELFEARSPKDAGMLAEVTGTASFGKDTKGKQRLVLTDLEGVAHEYLISK
DKHVMVHDGQVVNRGETIVDGPIDPHDILRLQGIEALARYIVHEVQEVYRLQGVKINDKH
IEVIVRQMLRRVVISDSGDSDFILGEQVERAEVLIANDKLAAEGKELAKYDNILLGITKA
SLSTDSFISAASFQETTRVLTEAAIMGKVDDLRGLKENVIVGRLIPAGTGLAYHKNRKRL
QSKVESLLPFAEVAAEVMAESSGEVAE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcttactcgaactcttcaagcaagtcgcacaagacgaagaatttgacgcgatt
aaaatcgggctcgcatcgcctgagaaaatccgttcttggtcttttggcgaagtgaagaag
ccagaaaccatcaactaccgtacgttcaagcctgagcgtgacggtctgttttgtgctcgc
atctttggcccgatcaaagattatgaatgcttgtgtggtaagtacaaacgtctgaaacac
cgtggcgtaatttgtgaaaaatgtggcgttgaggtgactttgtcaaaagtccgtcgcgaa
cgcatgggccacattgagctggctagcccagttgcgcacatctggttcttgaaatcactg
ccatctcgtttgggtatggtattggatatcgctttgcgcgatatcgaacgcgtattgtat
ttcgaagcgttcatcgtgatcgagccaggcatgaccccgctacaacgtggtcaattgctg
actgaagaagattacttctctaaagttgaagaatacggcgacgaatttgttgcgatgatg
ggtgccgaagcggtacgtgaattgctcaagtcgatggacgttgatcaagagatcagccgt
ctgcgcgctgaactcgatagcaccggttcagaaactaagatcaagaaaatcgctaaacgc
ttgaaagtacttgaagcatttgagcgttcaggcatcaagcctgagtggatgattctggaa
gtgttgccagtattgccacccgagttgcgcccattggtgccactggatggtggtcgtttc
gcgacttccgatctgaatgatctgtatcgccgcgtcattaaccgtaataaccgtctgaaa
cgtctgcttgaattgcgcgcgcccgaaattatcgtgcgcaacgaaaagcgtatgttgcaa
gagtcggttgactccttgctcgataacggccgtcgcggtaaagcgatgactggcgcgaac
aagcgtccgctgaaatcgctggctgacatgatcaaaggtaagggcggtcgtttccgtcag
aacttgctgggtaaacgtgttgactactcaggtcgttcggtaattaccgtaggtcctact
ttgcgtctgcatcagtgcggtttgccaaagttgatggcgctcgaattgttcaagccattc
attttccataaattggaagtgatgggtctggcaacgacaattaaagctgcgaagaaaatg
gtggaaagccaagagcctgtagtttgggatatcttggaagatgtaatccgcgagcatcca
gtactgttgaaccgtgcgccaacgctgcaccgtttgggtattcaagcgtttgaaccgacc
ctgatcgaaggtaaagcgatccagctgcatccgttggtttgtgctgcattcaatgccgac
tttgacggtgaccagatggcggttcacgttccattgtcgctcgaagcgcaaatggaagcg
cgtacgttgatgttggcgtctaacaacgtattggcaccagccaatggtgagccaattatt
gttccatcgcaggatatcgtattgggtctgtactacatgacccgcgaagcgaagtacgct
aaaggcgagcgtttgaatgacgatggtcagcgtctgactatcttctctaacgtgtctgaa
gctttgcgtgcttatgcgaacaaagacgtgacattgcagactcgtgtttcaattcgcctg
aaagaatggttcaaaaatgaatcgggcgaatgggaaagcaagatggttcgccgtgatact
acggttggccgtgcgatcttgtctgaaatcctgccaaaaggcttggacttctcgcatatt
gacaagtcattgaagaaaaaagaaattggtaagctgatcaatgcgtctttccgccgttgc
ggtctgaaagatacggtcgtgtttgccgatcaattgatgtacaccggtttctcatactct
acgcgtggcggtatctcgatttgtgtcgatgatatgttggttcctgcgaagaaagttgaa
ttgctggccgccgcgcaatctgaagtgaaagagatcgagcagcagtacagctcaggtctg
gtaactcagggtgagcgctacaataaagtagtcgatatctggggtcgtgccggtgatcaa
atcgctaaggcgatgatggaccagctgggtaaagagccagtgcttgacgctaatggcaag
caggatgaacaagagtcgttcaactcgatttacatgatggctgactcaggtgcccgtggt
tctgccgcacagattcgtcagctggcaggtatgcgtggtctgatggctaagcctgatggc
tcgattattgagatgccgattacgaccaacttccgtgaaggtctgacggtactgcagtac
ttcatttcaacgcacggtgcacgtaaaggtctggcggataccgcattgaagacagcgaac
tcgggttacctgactcgtcgtctggtcgatgtaacgcaagatttggttgtgatcgaagat
gattgcggcacgaagaatggcgtggcaatgaaagccgttgttcaaggtggtgacgtagtt
gaagccttgcgtgagcgtatcttgggtcgagtagttgctaaagatgtaattgatccatct
tcacaagaaacattgtttgaagcgggttatctgctgaacgaagatgcggttgatgaaatc
gaattgcgtggcgtggacgaagtggtggtacgtactccactgtcatgcgaaacacgctat
ggtctatgtgctaagtgttatggtcgcgatttgggtcgtggtcatctggttaatagcggt
gaggctgtgggtgttatcgcagcacagtcgatcggtgagccaggtactcagttgacgatg
cgtacgttccacattggtggtgcagcatctcgagctgcggcggccaatcaggttgaagcc
aagtcaagcggtaatatcgcgtatagctctaatatgcgctatgtaaccaatgcgaagggc
gagcctgtagtgattgcacgttcggctgaagtattgattctggatgacaacggtcgcgaa
cgcgaaacgcacaaagtgccttacggtgctacgctgacagtaaaagatggcgacgtaatc
aaggctggtacggtattgggcacgtgggatcctcactcgcgtccaatcatcaccgagtac
tctggtaccgtgaagtttgaaaacgttgaagaaggcatgacggttgttaagcaagtcgat
gatgtaactggcttgtctacgctggtagttattgcctctaaagcgaaagtgacttcaagc
aagggcctgcgtccattagtgaaattgattgatgaatttggtaatgaaatgaaattggcg
ggtaccgatacgccagtcacaatttcgttccaagtgggttcgatcattactgtgaaagat
ggtcagcaagttggcgtgggtgatgtgctggctcgtattccacaggaatcagctaagacc
cgcgatattaccggtggtctgccacgcgttgctgagttgttcgaggctcgctcgccaaaa
gacgccggtatgttggctgaagtgacgggtacggcgagctttggtaaagataccaaaggt
aagcaacgtctggtgctgactgatcttgaaggtgttgcgcacgaatatctgatctctaaa
gataagcatgtgatggtgcatgatggtcaggttgtgaatcgtggtgaaacgattgttgat
ggcccgattgatccgcacgatatcttgcgcttgcaaggtattgaagctctggcgcgttat
atcgttcatgaagtgcaagaggtgtatcgcttgcagggtgtgaagattaatgacaaacac
attgaagtaattgtgcgtcagatgttgcgccgcgttgtgatttcagattcgggcgattct
gatttcatcttgggtgagcaggttgagcgtgccgaagtgttgattgcgaatgacaagttg
gcggcagaaggcaaggagttggcgaagtatgacaacatcttgctgggtattactaaggcg
tcattgtcgaccgactcattcatttctgctgcctcgttccaggagacgactcgagtgctg
actgaagcggccatcatgggtaaagtcgatgatctgcgtggtctgaaagaaaacgtgatc
gtagggcgcttgattcctgcgggtaccggtttggcatatcacaaaaatcgcaaacgcctg
cagagtaaagttgaatctttactgccatttgcagaagttgcagctgaagtgatggctgaa
tcatccggcgaagttgctgagtaa
DBGET
integrated database retrieval system
