Chitinibacter fontanus: HZU75_10530
Help
Entry
HZU75_10530 CDS
T06720
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cfon
Chitinibacter fontanus
Pathway
cfon03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HZU75_10530 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfon03021
]
HZU75_10530 (rpoA)
03400 DNA repair and recombination proteins [BR:
cfon03400
]
HZU75_10530 (rpoA)
Enzymes [BR:
cfon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HZU75_10530 (rpoA)
Transcription machinery [BR:
cfon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HZU75_10530 (rpoA)
DNA repair and recombination proteins [BR:
cfon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HZU75_10530 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QLI81939
UniProt:
A0A7D5VA59
LinkDB
All DBs
Position
2220812..2221795
Genome browser
AA seq
327 aa
AA seq
DB search
MQINANELLKPRIIDVQALAQAHAKVVMEPFERGYGHTLGNALRRILLSSMSGYAPTEVK
IDGVVHEYSALDGVQEDVVDILLNLKGVVLKLHGRDSVTLTLSKEGEGVVKASDIQLPHD
VEVINPDHVIAHLSAGGKLSMDITVEKGRGYQPAPSRVNKDEGRSIGTIILDASFSPILR
VSYQVESARVEQRTDLDRLIIDIETNGVIEPDEAVRQAARMLIDQLGVFADLEGTQEEKV
IEPQVTIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKAPNLGRKSLNE
IKEVLASKGLSLGMRLENWPPAGLDKP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcaatgcaaacgagttgctcaaaccgcgcatcatcgatgtgcaagctctggct
caagctcacgcgaaagtcgttatggagccgtttgagcgcggttatggccatactctcggt
aatgcactgcgccgaattttattgtcttcaatgtcgggttatgcccctactgaagtcaaa
attgacggagtggtgcacgaatattccgcgttggatggcgtgcaggaagacgttgtcgat
atcctgttaaacctgaaaggcgttgtgctgaagctgcatggtcgggactcagtcactctc
actctctcaaaagagggtgagggtgtcgtcaaggcttccgacattcagttgccacatgat
gttgaggtaattaatccggatcatgtgattgcacatctgtctgctggtggtaagctcagc
atggatatcaccgttgaaaaaggacgtggctatcagcctgctccttcacgtgtgaacaaa
gatgagggtcgttctattgggacgattattctggatgcttcattcagtccgattctccgt
gttagttatcaagtagaaagtgcccgtgtagagcaacgtactgatcttgatcgtctaatt
attgacattgagaccaatggcgtgatcgagcctgatgaagctgttcgtcaagctgcacgt
atgttgatcgaccaactcggtgtttttgctgatttggaaggtacgcaagaagagaaagtt
attgaaccacaagttacgattgatcctatcctactgcgtccagtggatgatcttgaatta
actgtacgttctgctaactgcttgaaagcggaaaacatttattacattggtgatctgatt
cagcgtactgagactgagcttttgaaagctccaaacttaggtcgcaaatcacttaatgag
atcaaagaagtgctggcttcgaaagggcttagccttggcatgcgccttgaaaactggcca
ccggctggcttagataagccttaa
DBGET
integrated database retrieval system
