Corynebacterium fournieri: CFOUR_01610
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Entry
CFOUR_01610 CDS
T09290
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cfou
Corynebacterium fournieri
Pathway
cfou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFOUR_01610 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfou03021
]
CFOUR_01610 (rpoC)
03400 DNA repair and recombination proteins [BR:
cfou03400
]
CFOUR_01610 (rpoC)
Enzymes [BR:
cfou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFOUR_01610 (rpoC)
Transcription machinery [BR:
cfou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFOUR_01610 (rpoC)
DNA repair and recombination proteins [BR:
cfou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFOUR_01610 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WJY96760
LinkDB
All DBs
Position
343523..347536
Genome browser
AA seq
1337 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHTDMSTLEAEMLMEKKDVEDDTNSEIADRAQKLEED
LAELEASGATAAARKKVQNAADKEMQHLREAGEREVERLDEIWTTFQKLAPKQMIIDENL
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELRGIIAEGKGQKKVRALKRLRVVA
AFQRSGNDPAGMILDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGTRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKRMALELFKPFVMKRLVDNDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMVKGPQEIGGE
GAYAPADENGPERGVYSSYREAIMAYDLGVLGLQAPIKVRIDHLRPTPEIEKEQFPDGWT
KGQAWMTETTLGRIMFNELLPFNFPYQEGAMVRKGGGSGKVLLGDIIQSMVEKYPMITVA
QVLDKMKDAGFYWATRSGVTISMSDVLILPNKIEVLEQYEKEAEAIERKFWEKGALTEEN
RYDRLVELWQDATNKVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLSVMEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRQGVKVPVAVALAGSGDETRFGRHDLVETSVSGRVVAADVTDADGKVIIEAGTELS
EERIDELVAAGVEQIKVRSVLTCQTPTGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGTISLEDEGNFWTLT
IHPDDGSDVVVYEKLSKRQGLAQVRRPMESNPDAMIERGLREGDHVEVGERLLRGAADPH
DVLEVLGRRGVEKHLIDEVQAVYRTQGVSIHDKHIEIIIRQMLRRGTVIDSGSTEFLPGT
LVDLSEARQVNAAAVADGGEPAEMRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGISRYRNIQVKPTEAARSAAYAIPTFGDSIYGDDGYG
EFTGASVPMDEFGFEEL
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaacctcttcgacgagcttcgcatcggcctggccaccgccgacgacatc
cgccgttggtcccacggcgaggtaaagaagcccgaaaccattaactaccgcacgctcaag
ccggaaaaggacggcctgttctgcgagcgcatcttcggcccgacccgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaagggcatcatctgcgagcgctgcggcgtc
gaggtgaccaagtccaaggtgcgccgcgagcgcatgggccacatcgagctcgccgctccg
gtgacccacatctggtacttcaagggcgtcccgtcgcgcctgggctacctgctggacctg
gcgccgaaggacctcgagcgcatcatctacttcgcggcgaacatcatcacctccgtcgac
gaggaggctcgccacaccgacatgtccaccctcgaggcggagatgttgatggagaagaag
gatgtcgaggacgacaccaactccgagatcgcggaccgcgcccagaagctggaggaggac
ctcgcagagctcgaggcctccggcgcaactgcggctgcccgcaagaaggtgcaaaacgct
gccgacaaggagatgcagcacctgcgcgaggccggcgagcgcgaggttgagcgcctggac
gagatctggaccaccttccagaagctcgcgccgaagcagatgatcatcgacgaaaacctc
tacgaggagctcgttgaccgctacgaggattacttcaccggcggcatgggcgcagaggcg
atccagaccctgatccgcaacttcgacctcgacgcagaggccgaggagctgcgcggcatc
atcgccgagggcaagggccagaagaaggtccgcgcgctcaagcgcctgcgcgttgtggcc
gcgttccagcgctccggcaacgacccggccggcatgatcctggacgcgatcccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggcggccgcttcgccacctcggacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgtttgaagcgcatgatcgacctg
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgttgcaggagtccgttgacgcc
ctgttcgacaacggccgtcgcggccgtccggtcaccggcccgggcacccgcccgctgaag
tccctgtccgacttgctcaagggcaagcagggccgcttccgccagaacctgctgggtaag
cgtgtggactactccggccgttccgtgattatcgtcggcccgcagctgaagctgcacgag
tgcggactgcccaagcgtatggcgcttgagctgttcaagccgttcgtgatgaagcgcctg
gtggacaacgactacgcgcagaacatcaagtccgccaagcgcatggtggagcgccagcgc
cccgaggtgtgggacgtgctcgaagaggcgatttcggagcacccggtgctgctcaaccgc
gcaccgacgctgcaccgcctgggtatccaggccttcgagccgaagctggtcgagggtaag
gccattcagctgcacccgctggcctgtgaggcgttcaacgccgacttcgacggcgaccag
atggctgtccacctcccgctgagcgctgaagcgcaggcggaggcccgcgtgctcatgctg
tcctccaacaacatcctgtccccggcgtccggcaagccgctggctatgccgcgcctggac
atggtcaccggcctgtacttcctgaccatggtgaagggcccgcaggagatcggcggcgag
ggcgcatacgcgcctgccgacgaaaacggcccggagcgcggcgtgtactcgtcctaccgc
gaggccatcatggcctacgacctgggcgtgctcggcctgcaggctccgatcaaggtccgc
atcgaccacctgcgtccgacgccggagattgagaaggagcagttcccggacggctggacc
aagggccaggcctggatgaccgagaccactctcggccgcatcatgttcaacgagctgctg
ccgttcaacttcccgtaccaggaaggcgccatggtgcgcaagggcggcggctccggcaag
gtgctgctcggcgacatcatccagtccatggttgagaagtacccgatgatcaccgtcgcg
caggtgctggacaagatgaaggacgccggtttctactgggcgacccgttccggcgtgacc
atctccatgtccgacgtgctcatcctgccgaacaagatcgaggtactcgagcagtacgag
aaggaagccgaggccatcgagcgcaagttctgggagaagggtgcgctgacggaggagaac
cgttacgaccgtctcgtggagctgtggcaggatgccaccaacaaggtgggtcaggccgtg
gaggacctgtacccggacgacaacccgattccgatgatcgtgaagtccggtgctgccggt
aacatgcgccagatctggaccctggccggcatgaagggcatggtcgtgaactcgcgcggt
gagtacatcacccgcccgatcaagacctccttccgcgagggcctgtccgtgatggagtac
ttcaacaactcccacggttcccgtaagggcctggccgataccgcgcttcgtaccgcggac
tccggctacctcacccgtcgtctggtggacgtggcgcaggacgtcattgtccgcgaagag
gactgtggcacccgccagggcgtcaaggttccggttgccgtcgcactcgcaggctcgggc
gacgaaacccgtttcggccgccacgacctggtggagacctccgtgtccggccgcgttgtc
gcagccgacgtcaccgacgccgacggcaaggtgatcatcgaggccggcaccgagctgagc
gaggagcgtatcgacgagctcgtggccgccggcgtcgagcagatcaaggtccgctccgtg
ctgacctgccagaccccgaccggcgtgtgcgcgaagtgctacggcaagtccatggcctcc
ggccagctcgtcgacatcggcgaggccgtgggcatcgtggctgcacagtccattggtgag
ccgggtacgcagctgaccatgcgtaccttccaccagggcggtgtcggcggcgacatcacc
ggcggtctaccgcgtgtgcaggagctgttcgaggcccgtgtgccgaagaaccgcgcaccg
atcgcttccgtggcgggcaccatctcgctcgaggacgagggcaacttctggaccctgacc
atccacccggacgacggctccgacgtggtggtctacgagaagctgtccaagcgccagggc
ctggctcaggtgcgccgcccgatggagtccaacccggacgccatgatcgagcgcggcctg
cgcgagggcgaccacgtcgaggtgggcgagcgcctgctccgcggcgcggccgacccgcac
gacgtgctcgaggtcctgggccgccgcggtgtggaaaagcacctgatcgacgaggtccag
gctgtgtaccgcacccagggtgtgtccatccacgacaagcacatcgagatcatcatccgc
cagatgctgcgccgcggcaccgtgatcgactcgggctccaccgagttcctcccgggtacc
ctggttgacctctccgaggcacgccaggtcaacgccgcagctgtggcggacggcggcgag
ccggcggagatgcgctccgagatcatgggcatcaccaaggcctcgctggccacggagtcc
tggctgtcggcggcctctttccaggagaccacccgcgtgctcaccgacgccgcgatcaac
aagcgctccgacaagctgatcgggctgaaggagaacgtgatcatcggcaagctgatcccg
gccggtacgggcatctcccgctaccgcaacatccaggtcaagccgaccgaggcggcacgc
tccgccgcgtacgcgatcccgacgttcggcgactccatctacggcgacgacggctacggc
gagttcaccggtgcctccgtcccgatggacgagttcggcttcgaggagctgtaa
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