Corynebacterium fournieri: CFOUR_02680
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Entry
CFOUR_02680 CDS
T09290
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfou
Corynebacterium fournieri
Pathway
cfou03420
Nucleotide excision repair
cfou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFOUR_02680 (uvrD1)
03430 Mismatch repair
CFOUR_02680 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfou03400
]
CFOUR_02680 (uvrD1)
Enzymes [BR:
cfou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFOUR_02680 (uvrD1)
DNA repair and recombination proteins [BR:
cfou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFOUR_02680 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
CFOUR_02680 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WJY96974
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All DBs
Position
549252..552602
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AA seq
1116 aa
AA seq
DB search
MPNPNPMSPVLLSRYLGQQYPPTEQQADVIGADPGPLLVVAGAGAGKTETMAARVVWLVA
NGFARPDEVLGLTFTRKAAQEMGKRIRDRLGALAQNTELVRRLDPSGELAEHLQVIAPTV
STYDSYAGELIREYGLLVPVEPDARLITDAELHAIATDVVVNYSGGLLTQLGSNPSLATV
VEDLLALNTSMGNELAAPGWVREHAHDFLAETESYPTGPRARVEFTKVLTRWRSKQEERA
NLLPLVEELGAELRRRGVVTFNEQMSVAAQLARDHRVVGASQRSRFRVVMLDEYQDTSHA
QRVLLRSLFGNGADPALTVTAVGDPMQAIYGWRGATAANLEAFVEDFPTADGTAPKKQLT
TSWRNPPEVLALANGVSDAVLGTGKSRAVAALSARPGADAGDVTLGFFPDQESEIDFVAD
RLAQEYRAAQEGGLPFSAAALVRKNRHSPPLAAALEARGVPYEIVGLAGLLDVPEVADTV
AIATMLVRPEDTAAALRILGGPAVGLGLADLNALASRAKNLRGANSAHEAAEEEADAAAG
AEEHLHEQLADLVARAAEISARTDKPEGLTDALADLGEPERYSEEGLVRMRDTAAKLRWL
RTHSLGKRLSDLFADIIHVFGIRTEVLARGSATGAVHLDRLLEEVAAYPGASLDGLLNFF
DLARAFEDGLTPGAVAVKEDRVQILTAHKAKGLEWDTVAVLHADAETYKAKTETFLTFTR
YLPTDTFGDPDIYPVFAEVENRTDFEKAGKAWLKEVAGDLAEETSRLFYVAVTRAAKRLI
VTGSRRRDGAAKEAEPYSHFAAMRERVPESSVVVWDDGLDTGTAQPGNEAGAPGQAAAPE
TGRWPHYAPAQQDLAAAEAVRAAIDELPDYTDGELFALWERDATALIEEHEAAQAADVAV
VMPGELTASDVVALKADPQQFARRARRPVPFKPNTYAKRGTAFHEWLEQFYGARPLLTED
ELPGSDEAEVDRTTLERLQRNFEASEWANRTPAYVEHPFELALGNSVVRGRMDAVFSDEN
GWVVVDWKTGEKPGRDAMESAQLQLAVYREAWRRIASDGKPVRAVFFYVRTGETFAPHAL
PDLAQLETMLGGAAAGSAADAGLQGDGTEMESEERQ
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacccgaaccccatgtcaccggtgctgctgtcgcgctacctggggcagcagtac
ccgcccaccgaacagcaagcggacgtcatcggtgcggacccgggcccgctgctggtcgtc
gcaggtgccggcgccggaaaaaccgagaccatggccgcacgtgtggtgtggctagtggcc
aacgggttcgcccgccccgacgaggtgctggggctgacgtttacccgcaaggcggcacag
gagatgggcaagcgcatcagagaccggctgggtgcgctcgcgcagaacacggagttggtg
cgtcggctggacccgtccggcgagctcgcggaacatctccaggtcatcgcgccgacagta
tcgacctatgactcatacgccggggaactcatccgcgagtacggactgctggtgccggtg
gagccggacgcgaggctgatcaccgacgcggagctgcacgctatcgccaccgacgtggtg
gtcaactactccggcgggctgctcacacagctgggatccaacccctcgctcgccactgtc
gtggaggacctgctggcgctgaacacctccatgggcaacgagctcgccgcgccgggttgg
gtgcgcgagcacgcgcacgatttcctcgccgagacggagtcgtacccgaccggcccgcgc
gcgcgggtggagttcacgaaggtgctcacccgctggcgctccaagcaggaagaacgcgcg
aatctgctgcccctggtggaagagctcggcgcggagcttcgccgtcgcggggtggtgacc
ttcaacgaacagatgtcggtggccgcgcagttggcgcgggaccaccgggtggtgggggcg
tcgcaacgctcccgcttccgcgtggtcatgctggacgaataccaggacacctcccatgcg
caacgagtgctgctgcgcagcctgttcggcaacggcgcggaccccgcgctgacagtgacg
gcagtgggggacccgatgcaggcgatctacggttggcgcggcgccacggccgcgaacctg
gaagcgttcgtggaggatttccccaccgctgacggcacggcgccgaaaaagcagctgacc
acctcctggcgcaacccgccggaggtgctggcgttggcgaacggcgtgtccgacgcggtg
ctcggtacagggaaaagcagagcggttgcggctctgtcggctcgccccggtgcggatgcc
ggtgacgtgactttggggtttttccccgaccaggagagcgagatcgatttcgttgcggac
cgcctcgcgcaggaataccgggctgcgcaagaaggtggactgccgttttcggcggcggcg
ctggtgcggaaaaaccggcactcgccgccgcttgctgcggcgcttgaggcgcgcggggtg
ccctacgagatcgtggggcttgccgggcttttagacgtgccggaggtcgccgacaccgtg
gccattgccaccatgctggtgcgcccggaggacacggcagcggcgttgcgcatcctcggc
ggacctgcagtcgggctggggctggccgacctaaatgcgctggcgtcgcgagcgaaaaac
ctgcggggggccaacagtgcacacgaggctgctgaggaggaggcggatgcggctgccgga
gcggaggagcacctgcatgagcagctcgcagatttagtggcgcgtgccgcggaaatctcc
gcccgcacggacaagccggaaggcctcacggacgcgttggcggatttgggcgagccggag
cgctacagcgaggagggactggtgcggatgcgcgataccgcggcgaaactgcggtggctg
cgcacgcatagcctgggcaagcgcttgagcgatttgtttgcagacatcatccacgtcttt
ggcattcgcacggaggtgctcgcccgaggatccgcaacgggcgcggtgcacctggaccga
ctgctcgaggaggtcgcggcttaccccggggcgagtctggacgggctgctgaatttcttc
gacctcgcccgcgccttcgaggacgggctgacaccgggggcggtggcggtcaaggaagac
cgcgtgcagatcctcaccgcgcacaaggccaagggcctggagtgggacacggttgcggtg
ctacacgcggacgcggagacgtacaaggccaagacggagactttcctcacgttcacccgc
tacctgcccaccgacacgttcggcgacccggacatttacccagtgttcgcggaggtggaa
aaccgcaccgactttgagaaggcaggcaaggcctggctcaaggaggtcgccggcgatttg
gcggaggagacctcccggctgttctacgtggcggtgacccgagcggcgaaacggctcatc
gtcactggttcgcgccgccgcgacggggcggcgaaagaagccgagccgtactcccacttc
gccgcgatgcgcgagcgcgtcccggaatcgagcgtggtggtgtgggacgacgggctcgac
accggcacagcccagcccggcaacgaagcaggcgcccccggccaggctgcggcaccggag
actggccgctggccccactatgcaccagcgcagcaggacctcgccgccgcggaggcagtg
cgtgccgcgatagacgagttgccggactacaccgacggcgagctgttcgcgctgtgggaa
cgcgatgccacagccttgatcgaggagcacgaggcggcgcaggccgcggatgtggcggtg
gtgatgccgggcgagctcacggcctccgacgtcgtcgccctgaaggcagacccgcagcag
ttcgcgcggcgtgcgcgccgtcctgtgccgtttaagcccaacacctacgccaagcgcggc
accgcgttccacgagtggctggaacagttctacggcgcgcgccctctgctgactgaagac
gagctgccgggcagcgacgaggcggaggtggaccgcaccacgctggagcggctgcagcgc
aatttcgaggcaagcgaatgggccaaccgcaccccggcgtatgtggagcaccccttcgag
ctcgcgctgggcaattcggtggtgcgcgggcgcatggacgcggtgttttcggatgaaaac
ggctgggttgtggtggactggaagacgggtgaaaagcccggccgggacgcgatggaatcg
gcgcaactgcagctggcggtctaccgtgaggcgtggcgccgtatcgcaagtgacggcaag
ccggtgcgggctgtatttttctacgtacgtaccggcgagacgttcgcgccgcatgctttg
ccggatctcgcgcagctggagacaatgcttggcggcgcggcggcaggctcggccgctgat
gcgggcctgcaaggcgatggaactgagatggaaagcgaggagcggcagtag
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