KEGG   Corynebacterium fournieri: CFOUR_03215
Entry
CFOUR_03215       CDS       T09290                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cfou  Corynebacterium fournieri
Brite
KEGG Orthology (KO) [BR:cfou00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfou03400]
    CFOUR_03215
Enzymes [BR:cfou01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CFOUR_03215
    5.6.2.6  RNA 3'-5' helicase
     CFOUR_03215
DNA repair and recombination proteins [BR:cfou03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CFOUR_03215
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr Helicase_C WH2_Lhr ResIII DUF6406 Cas3-like_C_2 PhoH
Other DBs
NCBI-ProteinID: WJY97073
LinkDB
Position
658283..662968
AA seq 1561 aa
MSAPILNRFHPQVAGWFEDVFAAPTAVQEQAWRAISDGENALVVAPTGSGKTLAAFLWSL
NSLVERAGQQALPIDGAQTSTHGGVKVLYISPLKALGVDVEDNLRAPLAGIARVAQRLGR
DMPDISVGVRSGDTPQSERNRQVRKPPDILITTPESLYLMLTSKAAGILKTVDTVIVDEI
HALAGTKRGVHLALSMERLRRLAGDFQRIGLSATVRPIEAVANFLGPKTTIINPPAKKRW
QLAVSVPVEDMSDLPVPEDASTIGDAVFDDALSLEGSEPAPPPGAAGSIWPHIERAIYDE
VMAHRSTIVFVNSRRTAERLTSQLNELWAKEHDPEALSPATRRPPAQLMKSVDTAGHAAA
VIARAHHGSVSKDERAQTETMLKEGSLRAVVSTSSLELGIDMGAVDLVIQVESPPSVASG
LQRVGRAGHTVGAVSEGTFYPKHRADLVQTAVTVPRMRDGLIEELHTPRSPLDVLAQQTV
AAVAVEDLDVDEWYDTVRRAWPYRDLAREVFDSVIDLVIGIYPSTDFAELRPRAILEGSV
LKARPGAQRVAVTNAGTIPDRGMFGVFLIASDQEGGRGPRRVGELDEEMVYESRVGDVFT
LGASSWRIENITRDQVQVTPAPGHTGRLPFWNGDGLGRPYELGKAVGAFRREATSSLDES
LDERARRNLLQYLEEQEEATGILPDEKTLVLERFTDELGDWRVVLHTPFGKGVNAAWALA
TGWRVAQETGMDAQAVAGDDGIVLRLPQGEKEPDGAIFQFDADEIADIVTEQVGNSALFA
SRFRECAARALLLPRRNPGKRAPLWQQRQRAEQLLDVARNYPSFPIILETVRECLQDVYD
LPALQEVMRDINTRRVRIAEVTTDQPSPFASSLLFNYTGAFMYEGDTPLAEKRAAALSLD
PSLLAKLLGTVELRELLDADIIAEVDASLRRVGRAETSEQFADTLRIVGPVPIDELALYT
TVPLRSLEQALGARMMRVRIGGREYVAQVLDAPLLRDALGVPIPPGVPAQVQTIPDALAQ
LVGRWVRTRGPFTRRDLADAFGLAVGVAHEPLSRLVDKDKVIPGRYRQGIEEEEYVAAEV
LRIIRSRSLAAARAQTRPVSQSAYGRFLPAWSNVAPVGVTPALRGADGVYSVLEQLAGVR
LPASAWETHILPARVGDYSPVMLDELTASGEITVVGAGKAGARDPWIMLLPADYAAQLMP
QVEEPLLSLTQSQVMEKVRRGGGFLFSDLLEPTTTTEELREAMWDLVEAGFLAPDSFAPI
RARLAGGKTAHRARRRPSRSRVRSGRTSFASAVPPDMVGRWSLTPTPDGDATRRSVALGE
SLLDRYGVVTRGSVVAEDILGGFALAYKTLSGFEASGKAMRGYLVEGLGASQFSTPATID
RLRGHQDSDDVVGWPSGAREPHVHVLAATDPANPYGAALPWPSQGATRSAGAMVVLIDGL
LAAHITRGGKTMTTFYDTFPDGVGDPMPLVVGALTQAVRDGRMQPLGVEKLDGGPAFSLK
EYGATVTHKGVKIGGRASAPPKRRGRSVTEALGELDGRDGPARQTGDSDRRGPAEGLNFD
D
NT seq 4686 nt   +upstreamnt  +downstreamnt
atgagcgcaccgattctgaaccgcttccacccgcaggtggcggggtggttcgaggacgtc
ttcgccgcccccaccgcggtgcaggaacaggcgtggcgcgcgatctccgacggcgagaac
gcgctcgtggtcgcgcccaccggctccggcaagaccctggcggcgttcttgtggtccctg
aactccctggtggagcgcgccgggcagcaggccctgcccatcgacggcgcgcagacctcc
acccacggcggggtgaaggtgctctacatctccccgctgaaggcgttgggcgtggacgtg
gaagacaacctgcgcgcgccgctggccggcatcgcgcgggtggcgcagcgcttgggccgc
gacatgcccgacatctccgtcggcgtgcgctccggcgacaccccgcagtccgagcgcaac
cggcaggtgcgaaagccgccggacattttgatcaccacgcccgagtcgctctacctcatg
ctcacctcgaaagcggcgggcatattgaagacggtggacacggtcatcgtggacgaaatc
cacgcgctcgccggcacgaagcgcggcgtgcacctcgccctgtccatggagcggctgcgg
cgcttggccggcgatttccaacgcatcggcctgtcggccacggtgcgcccgatcgaggcg
gtggcgaacttcctcgggccgaagaccaccatcatcaacccgcccgcaaagaagcgctgg
cagcttgccgtgagcgtgcccgtcgaagacatgtcggacctgcccgtgcccgaggacgcc
tccaccatcggcgacgccgtcttcgacgatgcactctcgttggaaggctcagagccggcc
ccgccgccgggggcggcaggatccatctggccgcacatcgagcgcgccatctacgacgag
gtgatggcgcaccgctccaccatcgtgttcgtgaactcgcgccgcaccgccgagcgcctg
accagtcaactcaacgagctgtgggccaaagagcacgacccggaggccctgtcgcctgcg
acgcggcgcccgccggcgcagctgatgaagtccgtggacaccgccggccacgccgccgcc
gtgatcgcgcgcgcccaccacggctcggtgtccaaggacgagcgcgcccaaaccgagact
atgctcaaggagggctcgctgcgcgcggtggtctccacctcctcgctggagctgggcatc
gacatgggcgcggtcgacctggtcatccaggtggaatcgccgccctcggtggcctccggc
ctgcagcgcgtgggccgtgctggccacaccgtcggcgcggtctcggagggcaccttctac
ccgaagcaccgcgctgacctcgtgcagacggcggtgacggtgccccgcatgcgcgacggt
ctcatcgaagagctgcacaccccgcgcagcccgctcgacgtgctggcccagcagaccgtg
gccgcggtcgcggtggaagatttggacgtggacgagtggtacgacaccgtgcgccgcgcc
tggccgtaccgggacctcgcgcgcgaggtgttcgactcggtgatcgacctggtcatcggc
atctacccgtcgaccgacttcgccgagctgcgcccgcgcgccatccttgagggctcggtg
ctcaaggcgaggcccggcgcgcagcgggtggcggtgaccaacgccggcaccatcccggac
cgcggcatgttcggcgtcttcttgatcgcgagcgatcaagaagggggcagaggacctcgg
cgcgtcggcgagctcgacgaggagatggtctacgaatcccgcgtcggcgacgtgttcacc
ctcggcgcctccagctggcgcatcgagaacatcacccgcgaccaggtgcaggtcaccccg
gcgccgggccacaccggccggctgccgttctggaacggcgacgggctgggccgcccctac
gagttgggcaaggctgtaggtgcgtttcgtcgagaagcaacaagctcgctggatgaaagc
ctggacgagcgcgcccgccgcaacctgctgcaatacctcgaggaacaggaggaagccacc
ggcatcctgcccgacgagaagacgctcgtgctggaacgcttcaccgacgagctgggggat
tggcgcgtggttctgcacaccccgtttggcaagggcgtcaacgccgcgtgggcgctggcc
accggctggcgggtcgcccaggagaccggcatggacgcccaagcggtcgccggcgacgac
ggcatcgtgctgcgcctgccgcaaggcgaaaaggaaccggacggggcgatcttccaattc
gacgccgacgagatcgccgacatcgtcaccgagcaggtgggcaactccgctctgttcgcc
tcccgcttccgcgaatgcgccgcccgcgccctgctgctgccgcgccgcaaccctggcaag
cgcgcgcccctgtggcagcagcgccagcgcgccgagcaactcttggacgtggcgcgcaac
tacccgtcgtttcccatcatcttggagacggtccgcgagtgcctccaagacgtctacgac
ctgcccgccctgcaggaagtcatgcgcgacatcaacacgcgccgggtgcgcatcgccgag
gtgaccaccgaccagcccagccccttcgcctcctcgctgctgttcaattacaccggcgcg
ttcatgtacgaaggcgacacccccttggctgagaagcgggcggcggcgctgtcgctggac
ccgtcgctgttggccaagctgctcggcaccgtggagctgcgcgagctgctggatgccgac
atcatcgccgaggtcgacgcgtcgctgcgccgcgtggggcgtgcggagacctccgagcag
ttcgccgacaccctgcgcatcgtggggcccgtgcctatcgacgagctcgcgctctacacc
accgtccccttgcgttccctggagcaggcgctcggcgcgcgaatgatgcgggtgcgcatc
ggcgggcgcgagtacgttgcccaggtgttggacgcgcccctgcttcgcgacgccctcggc
gtccccatcccgcccggcgtgcccgcccaggtgcagaccatccccgacgcgctcgcccag
ctggtgggccgatgggtgcgcacccgcgggccgtttacccgccgggacctcgccgacgcc
ttcgggctcgcggtcggtgtcgcgcacgagccgctgtcgcggctggtggacaaggacaag
gtcatcccgggccgctaccggcagggcatcgaggaagaggagtacgtcgccgccgaggtg
ctgcgcatcatccggtcccgctcgctcgcggcggcgcgcgcccagacccggccggtgtcg
cagtccgcctacgggcgcttcctgcccgcgtggtcgaacgttgccccggtgggggtcacg
ccggcgctgcgcggggcggacggggtctactcggtgctggagcagctcgccggggtgcgc
ctgccggcctcggcctgggagacgcacatcctgccggcgcgggtgggggactactcgccg
gtgatgctggacgagctgaccgcctccggcgagatcaccgtcgtcggcgccggcaaggcg
ggggcccgcgacccctggatcatgctgctgcccgccgattacgccgcccaactcatgcct
caggtggaggagccgctgctttctctgacccagtcccaggtgatggagaaagtgcgccgc
ggcggcgggttcttgttttccgacctgctcgaacccaccaccacaaccgaggagctgcgc
gaggccatgtgggacttggtcgaggcagggtttttggcccccgactcctttgcaccgatc
cgggcgcgcctggcgggcgggaagacggcgcaccgggcgcgccgcaggccctcgcgcagc
agggtgcgctcggggcggaccagcttcgcctcggcggtgccgccggacatggtggggcgc
tggtcgctcacgcccacgcccgatggcgacgccacccgccgctcggtcgcgctcggcgag
tcgctgttggaccgctacggggtggtcacccgcggctccgtggtcgctgaagacatcctc
ggtgggttcgcactggcctacaaaaccctgtccggtttcgaggcctccggcaaggcgatg
cgcggctacctcgtggaggggctgggcgcctcgcagttttccaccccggcgaccatcgac
cggctgcgcggccaccaggattccgacgatgtggtgggctggccctcgggcgcgcgcgag
ccgcacgtgcacgtgctggccgccaccgaccccgcgaacccctacggcgcggcgttgccg
tggccgtcccagggcgcgacccgctcggccggggcgatggtggtgctcatcgacggcctg
ctcgccgcccacatcacccgcggcggcaaaaccatgaccaccttctacgacaccttcccc
gacggggtgggagacccgatgccactggtcgtcggcgccttgacccaggcggtgcgcgac
gggcggatgcagccgctgggcgtggagaagcttgacggcgggccggcgttctcgctcaag
gagtacggcgcgaccgtgacgcacaagggcgtgaagatcggcgggcgtgcgtcggcgccc
ccgaagcggcgcgggcgcagcgtgaccgaggcgctcggggagctcgacgggcgcgacgga
cccgcccggcaaaccggcgacagtgacaggcgaggtccggccgagggcctgaacttcgac
gactag

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