Corynebacterium fournieri: CFOUR_04515
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Entry
CFOUR_04515 CDS
T09290
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cfou
Corynebacterium fournieri
Pathway
cfou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFOUR_04515 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfou03019
]
CFOUR_04515 (deaD)
03009 Ribosome biogenesis [BR:
cfou03009
]
CFOUR_04515 (deaD)
Enzymes [BR:
cfou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CFOUR_04515 (deaD)
Messenger RNA biogenesis [BR:
cfou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFOUR_04515 (deaD)
Ribosome biogenesis [BR:
cfou03009
]
Prokaryotic type
rRNA helicases
CFOUR_04515 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WJY97330
LinkDB
All DBs
Position
913713..915770
Genome browser
AA seq
685 aa
AA seq
DB search
MSISENATGGENEPDTNLSENQKDPQDVAAEIVEAVANDTRDAGVSEETGATDAVAIEND
DDVLKLNDEPSAEPSKPENGFEKLGLPDAVVEAVKRVGFEQPSPIQEQTIPLLMKGRDVV
GLAQTGTGKTAAFALPVLSQIDPAKRYPQALVLAPTRELALQVSDSFQSFADHIGGVSIL
PIYGGQAYGIQLSGLRRGAQVIVGTPGRVIDHLEKGSLDISNLEFLVLDEADEMLNMGFQ
EDVERILEDTPDSKQVALFSATMPNAIRRISRDYLNDPEEVTVKSETRTNTNITQRYLFT
AHRNKLDAITRILEVTEFEAMIVFVRTKNETEEIAEKLRARGFSAAAINGDIAQQQRERT
VDQLRDGRLDILVATDVAARGLDVERISHVLNYDIPNDTESYVHRIGRTGRAGRSGEAIL
FVTPRERRMLRSIERVTNATIEEMDLPTVDEVNESRKAKFMDSITESLEATDLQIFKTMV
REYSAANNVPMDDIAAALATQALAGDEFLMKEPPRDKRDRRDRFDRDDRRGRGRDRFDRD
DRGDRRGRRFDDSGNFDTYRLDVGKRQHVRPGAIVGALANEGGLNSKDFGRITIGGDFTL
VELPKNLDQAVLDRLVDTRISGQLINIQRDHGAPPRDRGGRGGRGGGGYRGGRGGYRGGK
GGRNDRGDRGGRGGYRGGRDRYDRD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccgaaaacgccaccggcggcgagaatgagccggacacgaatttgtcggaa
aaccagaaagacccgcaggatgtcgcggccgaaatcgttgaggccgtagcaaatgacacc
agggatgcgggggtttctgaggagaccggcgccacggatgccgtggccattgaaaacgac
gatgatgtgctgaagcttaacgacgagccttcggccgaaccctccaagccggaaaatggc
tttgaaaagctgggcctgcccgatgctgtggtcgaggccgtcaagcgcgtcggcttcgag
cagccctcgccgattcaggagcagaccatcccgctgctgatgaaaggccgcgacgtcgtc
ggcctggcgcaaacgggcacgggcaagaccgcggcgttcgcgctgccggtgctctcccaa
atcgacccggcgaagcgctacccgcaagcgctcgtgctcgccccgacgcgtgagctggcg
ctgcaggtgtccgactccttccagtccttcgccgaccacatcggcggcgtgagcattctg
ccgatctacggcggccaggcgtacggcatccagctctccggtctgcgccgcggcgcgcag
gtcatcgtgggtaccccgggccgtgtgatcgaccacctggaaaagggctccctggacatc
tccaacctggagttcctcgtcctggacgaggcggacgagatgctcaacatgggcttccag
gaagacgtcgagcgcatcttggaggacaccccggattccaagcaggtggcgctgttctcg
gcgacgatgccgaacgcgatccgccgcatctcccgcgactacctcaacgacccggaagag
gtcaccgtcaagtcggagacgcgcaccaacaccaacatcacgcagcgctacctgttcacg
gcgcaccgcaacaagctcgacgcgatcacgcgcatcctcgaggtgaccgagttcgaggcg
atgatcgtgttcgtgcgcacgaagaacgaaacggaagagatcgccgaaaagctgcgcgcc
cgcgggttctccgcggcggccattaacggcgacatcgcccagcagcagcgcgagcgcacc
gtggaccagctgcgcgacggccgcctggacatcctcgtggccacggacgtcgccgcccgc
ggcctggacgtcgagcgcatctcgcacgtgctcaactacgacatccccaacgacacggag
tcctacgtccaccgcatcggccgcaccggccgcgcgggccgctccggcgaggcaatcctg
tttgtcaccccgcgtgagcgccgcatgctgcgctccatcgagcgcgtgaccaacgcgacc
atcgaagagatggacctgcccaccgtcgatgaggtcaacgagtcccgcaaggccaagttc
atggactcgatcaccgagtctctggaagcgaccgacctgcagattttcaagaccatggtg
cgcgagtactccgcggccaacaacgtgcccatggacgacatcgccgcggcgcttgcaacc
caggcgctggctggcgatgagttcctgatgaaggagccgccgcgcgacaagcgtgaccgc
cgcgaccgcttcgaccgcgacgaccgccgcggccgcggccgcgaccgtttcgaccgcgac
gaccgcggagaccgccgtggccgccgcttcgacgactccggcaacttcgacacctaccgc
ctggacgtgggcaagcgccagcacgtgcgccccggcgccatcgtcggcgcgctggccaac
gagggcgggctgaactctaaggacttcggccgcatcaccatcggcggcgacttcaccctc
gtggagctgccgaagaacctggatcaggccgtgctggaccgcctggtggacacccgcatc
tccggtcagctgatcaacatccagcgcgaccacggagcgcccccgcgcgaccgcggcggc
cgtggcggacgcggcggcggtggttaccgcggtggtcgcggcggttaccgcggcggcaag
ggcggccgcaacgaccgcggcgatcgcgggggccgtggcggctaccgcggcggacgcgac
cgctacgaccgcgactag
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