Corynebacterium fournieri: CFOUR_05735
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Entry
CFOUR_05735 CDS
T09290
Name
(GenBank) ski2-like helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cfou
Corynebacterium fournieri
Brite
KEGG Orthology (KO) [BR:
cfou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfou03019
]
CFOUR_05735
Enzymes [BR:
cfou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CFOUR_05735
Messenger RNA biogenesis [BR:
cfou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CFOUR_05735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
AAA_30
nSTAND3
CC_Bre1
nSTAND_NTPase5
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
WJY97564
LinkDB
All DBs
Position
complement(1179323..1182085)
Genome browser
AA seq
920 aa
AA seq
DB search
MLSPEPGTSFLREFAAAKPFALDDFQLQACQAVEQDRGVLVCAPTGSGKTIVGEFAVALA
LHRGTKCFYTTPIKALSNQKYHDLVAEHGAEAVGLLTGDTSINGSAEIVVMTTEVLRNML
YAESPQLARLSHVVMDEIHYLADRDRGAVWEEIILNLDDSVSLIGLSATVSNSEEFGEWL
DAVRGDTEVIVSEHRPVPLSQYMMVGRKMFPLFEPGADGRVNRGLEHAIERIEAGSSDEG
RRDFEEGRGFRARSRSGRVRGQDKIRPVGRPEVVSALQREDMLPAIVFIFSRAGCDGALF
QCLRSRKELTSPQERAEIEQIIDEGIDGIPEEDLEVLNFRQVRTAWMRGFAAHHAGLLPA
FKHIVEQLFVRGLVKVVFATETLALGINMPARTVVLEKMVKFNGEAHVDLTPGQYTQLTG
RAGRRGIDHIGNAVVQWAPALDPHQVAGLASTRTYPLISQFQPGYNMAINMLAMNGYEDS
IRLIEQSFAQFQTDRSVVGEVRDIERLQQKVRTLRDKLDRDISAFAPPSDDAAAELVEYS
QLRRDLTDAEKQARRDHLDSRHTETKKILGSLQVGQVIALPGKRKPELAAVVQPAGKPHD
PRPWVTTERGWSGRIDAAAFTNPPVVVGRVKVPRHMQDKPRRHARKVADLLHRGHFNAPK
RLREHSRVRPNKQITALREAIRNHPVHDWPAADRELLARTAEDIVREERALAKLEQRVDT
STDSLGRTFERIIGLLTEMDYVELHDGEPQVTDEGERLSRIHNVSDLLVAQCLKRGIWDG
LDPAELAGVASMLVFENRRATGGNPEAATDAMADAMNETMRIYGELVSDEQRHNLPATRL
PDPGFCLSVHQWTAGAPLGYALAAAAESGAELTPGDFVRWCRQVIDLLEQIKKTGYSDTI
RDNANRAVDAIRRGVVAIGN
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgctttcccccgaacctggtacctcgtttctgcgggaattcgccgccgcgaagccgttt
gctctcgacgattttcagctccaggcctgccaggcggtggagcaggatcgcggagtgctc
gtgtgcgccccgacaggctccggcaagaccatcgtcggcgagttcgccgtcgcactcgcc
ctgcaccgcggcacgaagtgcttttacaccacgccgattaaggcgctgagcaaccagaag
taccacgacctcgttgcagagcacggcgccgaggcagtggggctgctcaccggcgacacc
agcatcaacggctccgccgagatcgtggtgatgaccaccgaggtcctgcgcaacatgctc
tacgcggagtcgccgcagctggcgcggctctcacacgtggtgatggatgagatccactat
ttggccgatcgcgaccggggtgcggtgtgggaggagatcattctcaacctcgacgattcg
gtgagcctgatcgggctgtcagccaccgtttccaactcggaggagttcggcgagtggctc
gacgctgtgcgcggggataccgaggtgatcgtctccgagcaccgcccggtgccgctgagc
cagtacatgatggtgggccgcaagatgttccccctgttcgagccgggcgcggacggcaga
gtaaaccgaggcttggaacacgccatcgagcgcattgaggcgggatcgtcggacgagggc
cgccgcgacttcgaagagggccgcgggttccgcgcgcgttcacgcagcggtcgtgtgcgc
ggccaggacaagatccgcccagtcggccgcccggaggtcgtctccgcgctgcagcgcgaa
gacatgctgccggccatcgtgttcatcttctcccgcgctggatgcgacggcgcgctgttt
cagtgcctgcgctcgcgcaaggagctgacgtccccgcaggagcgcgccgagatcgagcag
atcatcgacgaaggcatcgatggcatccccgaagaagacttggaggtgttgaacttccgc
caggtgcgcaccgcctggatgcgcggcttcgccgcccaccacgccggcttgctgcccgcc
ttcaagcacattgtggaacagctgtttgtccgcgggctggtcaaggtcgtcttcgccacc
gaaaccctcgcgttgggcatcaacatgcccgcgcgcactgtggtgttggagaagatggtc
aagttcaacggcgaggcccacgtagatctcacgccgggccagtacacgcagctcactggc
cgtgcgggacgccgcggcatcgaccacatcggcaacgcagtggtgcagtgggcaccggcg
ttggatccgcaccaggtggcgggattggcgtccacacgcacctatccgctcatctcccag
ttccagcccggctacaacatggccatcaacatgctcgccatgaacggctacgaagactcc
atccgcctgatcgagcaatccttcgcgcagttccaaacggaccggtctgtggtgggggag
gtgcgcgacatcgagcggctgcagcagaaggtgcgcacgctgcgcgacaagctcgaccgc
gacatctccgcgttcgcgccgccgagcgacgacgcggcggccgaactggtggaatactcc
cagctgcgccgcgacctcacggacgccgagaagcaggcgcgtcgcgaccacctggacagc
cgccacaccgagacgaagaagatcctcggttcccttcaggtcggccaggtcatcgctctg
cccggcaagcgcaaacccgaacttgcggcagtggtgcagcctgcgggcaaaccgcacgac
ccgcggccctgggtgaccacagaacgcggctggtccggccgcatcgatgcggcggcgttc
acgaacccgcccgtcgtggtgggccgcgtgaaggtgccgcgccatatgcaggacaagccg
cgacggcacgcgcgcaaggtggcggatctgctccaccggggccatttcaacgcacccaaa
cgcctgcgcgagcactcccgcgtgcggcccaacaagcagatcactgcgctgcgcgaggct
atccgcaaccacccggtgcacgactggccggctgctgaccgcgaactgctcgcccgcact
gccgaggacatcgtgcgcgaggagcgcgccctggccaagctagagcaacgcgtagacacc
tccaccgattcgctgggccgcacgttcgagcgcatcatcggattgctcacagagatggac
tacgtcgagcttcacgacggcgaaccgcaggtcaccgacgaaggcgaacgcctctcgcgc
atccacaacgtctccgacctgcttgtggcgcagtgcctcaagcgcggcatctgggacggg
ctggacccggcggaactcgcaggcgtcgcctccatgctcgtctttgaaaaccgacgtgca
actggcggcaaccccgaagcagcgaccgacgccatggccgacgccatgaacgagaccatg
cgcatctacggcgaactggtctccgacgagcagcgccacaacctgccggcgacccgcctg
ccggaccccggtttctgcttgtccgtccaccaatggaccgcgggcgccccgctcgggtac
gcgctcgccgccgcagccgaatctggcgcagagctgacaccgggcgacttcgtgcgttgg
tgccgtcaggtgattgacctgctggagcagatcaagaaaacagggtactcggacacgatc
cgcgacaacgccaaccgagccgtggacgccatccgccgcggcgtggtggcaattggaaac
tag
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