Campylobacter fetus subsp. testudinum pet-3: CR44_00935
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Entry
CR44_00935 CDS
T03583
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cfp
Campylobacter fetus subsp. testudinum pet-3
Brite
KEGG Orthology (KO) [BR:
cfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfp03032
]
CR44_00935
03400 DNA repair and recombination proteins [BR:
cfp03400
]
CR44_00935
Enzymes [BR:
cfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CR44_00935
DNA replication proteins [BR:
cfp03032
]
Prokaryotic type
DNA Topoisomerases
CR44_00935
DNA repair and recombination proteins [BR:
cfp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CR44_00935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Zn_ribbon_19
DNA_ligase_ZBD
Zn_ribbon_PaaD
Zn_ribbon_IS1595
DUF1272
Toprim_4
Zn_ribbon_ACC
DUF7479
Zn_ribbon_TFIIB
Zn_ribbon_8
ADK_lid
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AJB44830
LinkDB
All DBs
Position
166917..169001
Genome browser
AA seq
694 aa
AA seq
DB search
MSKLIIVESPAKAKTIKNFLGSEYKVIASKGHIRDLPKSSFGIKIEDDKFTPEYRVSSDH
SAIVKEIKDLAKSADTIYLATDEDREGEAIAYHIAAAIGKKPEMLPRIVFHEITKSAIQN
ALENPRSLNMDSVNAQQARRLLDRIVGYKLSPLLNSKIQRGLSAGRVQSSALKILVDKER
EIRNFKPIEYFSIDTKFKKDLEAELVEFEGSKIEKLTITNKDRAKFIVDKIKDEGFSVAN
VESKERKISPQPPFMTSTLQQSASNRLGFSPKKTMMLAQNLYEGVQTNNGFMGAITYMRT
DSLNLAKEAISAARDLIKEEFGDKYLPKSANFYTTKNKGAQEAHEAIRPTNLSFTPAEAA
KFLEKDLLKLYTLIYNRFLACQMSASVSQTQNIFIKSKSSIFKISGRKLVFDGFYKVYGD
LDKDKILPNLNVGDKMELESLSSQSHFTEPPSRYSEAGLVKKLESLGIGRPSTYAPTISL
LTSRDYVKVDKKQLIPNEIAFNITSMLEEHFNDIVDSDFTSKMEEKLDDIAENKADWQEV
LSKFYHPFMQKIDYGKKNIKSQKTTEPIGEKCPECGGELVKRKGRFGEFIACLNFPKCKY
SRNLKNEAKVEKKEPQKIGVACPQCGGDIVERFSKKGKFFGCANYPKCNFISKYQPTDQK
CPQCGKMMVYKELKKGNFYECSACKFKKEGNDNE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagttaattatcgtagaatctccagccaaagcaaaaactataaaaaattttttg
ggcagcgagtataaagttatagctagtaaaggtcacatcagagatcttccaaagtctagc
ttcggcataaaaatagaagatgataaattcacaccagagtacagagtaagcagcgatcac
agcgctatagtaaaagagataaaagatctagcaaagagtgcagataccatatatctagct
actgatgaggatagagagggtgaagctatagcgtatcatatagcagccgcaatcggtaaa
aaacctgagatgcttccaagaatagtatttcacgagataacaaagtcagccatacaaaac
gcattagaaaatccacgtagtttaaatatggatagcgtaaatgctcaacaagcaagaaga
cttttagataggatagttggttataaattaagtccgcttttaaactcaaaaatccaaaga
ggtcttagtgcagggcgcgttcagagttcggctttgaagatattagtagataaagagcgc
gaaataagaaacttcaagcctatagagtattttagcatagatactaaatttaaaaaagat
ttagaagctgaactggtcgagtttgagggttctaagatagaaaagcttaccataacaaac
aaagatcgtgcaaaatttatagttgataagataaaagatgagggctttagtgttgcaaat
gtagagagcaaagagcgaaagataagccctcaacctccgtttatgacttctactttgcaa
caaagtgcttcaaatagacttggatttagtcctaaaaaaactatgatgttagcccaaaat
ttatacgaaggcgtacagacaaataacggttttatgggcgctataacatatatgagaaca
gatagtttaaatttagccaaagaagctataagcgcagctagagatctgataaaagaggaa
tttggcgataaatatcttccaaaatctgcaaatttttacactacaaaaaataaaggagct
caagaagctcatgaggcaattcgtcctacaaatttaagctttactccagcagaggcggct
aagtttttagaaaaagatctgctaaaactctatactcttatatacaatagatttttggct
tgtcagatgtctgcaagcgtatcgcaaactcaaaatatatttataaaaagcaaaagtagt
atttttaaaatttcgggtagaaagcttgtatttgatggattttacaaagtttatggtgat
cttgataaagataaaattcttcctaatttaaatgtaggcgataaaatggagcttgaaagc
ttaagcagccaaagtcattttactgagccaccatcgaggtattcagaagctggtttagta
aaaaaactcgaaagtcttggtataggcagaccaagtacgtatgctccgactatttctttg
cttactagcagggattacgtaaaagtagataaaaaacagcttattccaaatgagatagca
tttaatataactagtatgcttgaagagcattttaatgatatagtagatagcgattttaca
tctaaaatggaagagaaacttgatgatatagcagaaaataaagcggattggcaagaggtt
ttatctaaattttatcatccttttatgcaaaaaatagattatggtaaaaaaaatataaag
agtcaaaaaacaaccgaacccataggcgaaaagtgccctgagtgcggcggtgagcttgta
aagcgaaaaggaagatttggtgagtttatcgcttgtttaaatttcccaaaatgtaaatat
tctagaaatttaaaaaatgaagccaaagttgagaaaaaagagccgcaaaaaatcggcgta
gcatgtcctcagtgcggtggcgatatagttgagagatttagcaaaaaaggtaaatttttt
gggtgtgcaaactatccaaaatgcaactttataagtaaatatcagcctacagatcaaaaa
tgcccacaatgtggtaaaatgatggtttataaagagcttaaaaaaggcaatttttacgaa
tgttctgcttgtaaatttaaaaaagaagggaatgacaatgagtaa
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