Campylobacter fetus subsp. testudinum pet-3: CR44_04825
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Entry
CR44_04825 CDS
T03583
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfp
Campylobacter fetus subsp. testudinum pet-3
Pathway
cfp03420
Nucleotide excision repair
cfp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CR44_04825
03430 Mismatch repair
CR44_04825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfp03400
]
CR44_04825
Enzymes [BR:
cfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CR44_04825
DNA repair and recombination proteins [BR:
cfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CR44_04825
MMR (mismatch excision repair)
Other MMR factors
CR44_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AJB45546
LinkDB
All DBs
Position
complement(978826..980865)
Genome browser
AA seq
679 aa
AA seq
DB search
MALSKLNREQYTAATAPTGYNLVIASAGTGKTSTIVARIAHLLNLGMKPERILLLTFTNK
AASEMIDRLSSYFSAKTVGSIMAGTFHSVSNSLLKKLNKGVILKQPSELKTLLKSLVERR
EFHRIGEVKAYSGAYLYDVYSLFCNSCVNDESFADWFSENYSDQSVYAEVYEDILREFEE
QKSRFNYADFNDLLIKMRNELRKGARVFYDEILVDEYQDTNSLQGSLIDAFNAKSLFCVG
DFDQSIYAFNGANIDIIGSFTQRYKDAKVYSLNVNYRSSAKILALANKVIAQNPRLYPKE
LTVSRIGNFKAPSLLIYDELFLQYENISEIILNSHYKKDDIAIIFRNNSSADGLEVALKE
QGISCKRKGGVSFFESREIKALIDLIGIYVNPKDIMAFIHVFEYVRGVGNAAAKEIFDTL
LALGDKSIVKGLLNPDKSVKVYERSKKNHQLGLFDDFSEFMDSARFAGLDLSKEFMENPV
LNYSNLNTNGAIFLYELYKLLMQIQGKTSSYEVVNSVINSGVYHIIVDFLATKRATLKNG
NVDLNLKDEAKDRIYAKSKVLLEMSKRHNYCDIFYNFLTLGRTEMSEGEGVNLLTVHASK
GLEFSLVFVVDLAQNRFPNLKLMGMGGSLEEERRLFYVAVTRAKDELYLSYAKYDKIRKI
DYKPSCFLEEAGMVKRFGA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttagcaaactaaaccgcgaacaatacaccgccgcaactgctccaactgggtac
aatctagtcatagctagcgcaggaactggaaaaactagcacgatcgtggctcgtatagca
catcttttaaatttaggtatgaaaccagagcggatactgctacttacttttacaaataaa
gccgctagcgaaatgatagatagattatcaagttattttagtgcaaaaacggttggttct
ataatggctgggacttttcattctgtttcaaattcgcttctaaaaaagttaaataaaggt
gtcattttaaagcagccaagcgaactaaaaacgcttttaaaaagcttagtagaaagacgc
gaatttcataggataggtgaagtaaaagcttacagtggcgcatatctttatgatgtttat
tcgcttttttgcaattcgtgtgtgaatgatgaaagttttgctgattggttcagtgaaaac
tacagtgatcaaagtgtctatgctgaggtttatgaggatattttaagagaatttgaggag
caaaaatcacgttttaattacgccgattttaatgatttgctcattaagatgagaaatgag
ctaagaaagggcgcaagggtattttatgatgaaattttagttgatgagtatcaagataca
aactcacttcaaggatctttgatagatgcttttaatgcaaaaagcttattttgcgtggga
gactttgatcaaagtatttatgcttttaacggcgcaaacatcgatataataggaagtttt
actcaaagatataaagatgccaaagtgtattctttaaatgtaaattatagaagtagcgca
aagatactagccctagcaaataaagtaatagcgcaaaatccgcgtctatatccaaaagag
cttacagttagcagaatcggaaatttcaaagctccgagtttgcttatttatgacgagcta
tttttgcagtatgaaaatatatccgagattattttaaattcccactataaaaaagatgat
atcgcgataatttttcgcaataattcgagtgcggatgggcttgaagtcgctttaaaagaa
caaggaattagctgtaaaagaaaaggcggcgttagcttttttgagtcacgagagataaaa
gcgcttatagatttgatcggaatttatgtaaatccaaaagatattatggcgtttatccat
gtttttgagtatgttagaggagttggaaacgccgctgcaaaagagatatttgatacgctt
ttagctttaggcgataaaagcattgtaaaaggtcttttaaatcccgataaatcagttaaa
gtttatgagcgttcaaaaaagaatcaccagttagggctttttgatgattttagtgaattt
atggatagcgctagatttgctggtcttgatctaagtaaagaatttatggaaaatccggtt
ttaaattattcaaatttaaataccaacggagcgatttttttatacgaactttataaatta
ttgatgcagatacaaggaaaaacgagctcatatgaagttgttaattctgttataaactca
ggagtgtatcatatcatcgttgattttttagctaccaaaagagctactttgaaaaacgga
aatgttgatttaaatttaaaagatgaagccaaagatagaatttacgcaaaatcaaaagtg
cttttagagatgagcaaacgtcataattactgcgatatattttataattttttaactctt
ggaagaactgaaatgagcgaaggtgagggcgtaaatttattaacagtgcatgctagcaaa
ggtcttgagtttagcttggtttttgtagtggatctagcacagaaccgttttccaaattta
aaacttatgggaatgggtgggagcttagaagaagaaagaaggcttttttatgtcgcggtt
actagagccaaagatgagttgtatctaagctatgcaaagtatgataaaatcagaaaaata
gactacaaaccaagttgttttttagaagaagctggtatggtgaagcgttttggagcttaa
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