Campylobacter fetus subsp. testudinum pet-3: CR44_06485
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Entry
CR44_06485 CDS
T03583
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cfp
Campylobacter fetus subsp. testudinum pet-3
Pathway
cfp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CR44_06485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfp03021
]
CR44_06485
03400 DNA repair and recombination proteins [BR:
cfp03400
]
CR44_06485
Enzymes [BR:
cfp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CR44_06485
Transcription machinery [BR:
cfp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CR44_06485
DNA repair and recombination proteins [BR:
cfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CR44_06485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AJB45862
LinkDB
All DBs
Position
complement(1313918..1318057)
Genome browser
AA seq
1379 aa
AA seq
DB search
MLNSLYSGNRLRVDFSNVAKEIDVPNLLQLQKKSFDHFLNLDNSQTESGIEKVFKSIFPI
HDPQNRLTLEYVSSEISKPRYTVRECMERGLTYCVNLKIKIRLIVHDRDEKTSEKVGVKD
IKEQEIFVREIPLMTDRISFIINGVERVVVNQLHRSPGVIFKEEESPTVVNKLIYTAQII
PDRGSWLYFEYDTKDVLYVRINKRRKVPITILFRALGYKKQDIVKLFYPIQTLNIKNNKF
LTMFNPDDFSGRVDYDIKDEDGNILHQAGKRLTKKKADKLIEDGLKFVEYPVEVLVNRYL
ASPVIDKESGEVIYDTLTQLDENKLAKIVAEQNSIEIANDLASGVDDAIINSFLQDYETL
KLLKQTEGLEDENDLAAIRIYKVMRPGEPVVKEAARTFVNDLFFNPERYDLTKVGRMKMN
HKLGLSVPEYVTVLTNEDIIKTAKYLIKVKNGQGYIDDRDHLGNRRIRSIGELLANELHL
GFVKMQKAIRDKFTSLSNNVDELMPYDLVNPKMITTTIMEFFTGGQLSQFMDQTNPLSEV
THKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSTYAKVNDL
GFVESPYRKVIDGKVTNEIVYLTATQEEGHIIAPASTVLDANDVIKEDLIEVRRDGEMLL
AKREDVTLIDLCSGMVMGVAASLIPFLEHDDANRALMGSNMQRQAVPLLRSTAPIVGTGM
EAIVARDAWEAIKAKRGGVIEKVDNRNIFILGEDENGPYIDQYTMEKNLRTNQNTTFTQH
PIVKKGDIVKSGQIIADGSSMEKGELAIGKNALIAFMPWNGYNYEDAIVMSERMIRADAF
TSVHIYEKEIEARELKDGVEEITRDIPNMKEEDLMHLDESGIVKIGTHIKPGMILVGKVS
PKGEVKPTPEERLLRAIFGEKAGHVVNKSLYAGASLEGVVIDVKIFTKKGYEKDARSFKA
YEDEKNILEKEHHDRLLMLDREEMLRVTALLSKNPLESELEIGKNSYKKGDKIKRSDLDN
VNRFTLNTYVKCFSKEIQKTYEDMKAYFQNEKKKLKDEHDAKLEILEKDDILPSGVVKLV
KVYLATKRKLKVGDKMAGRHGNKGIVSNIVPDVDMPYLPNGRTVDIVLNPLGVPSRMNIG
QILESHLGLIGMKLGEQIEEIFENKKAEWIKELRAKMTEIADVSRLMDAKVILSKIDDDK
LIDYARDWASGVRFATPIFEGVKADEFKKLFEMAKIDMDGKTELYDGRTGSKMAERVNVG
CMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALSGGQRFGEMEVWALEAYGAAHTLR
EMLTVKSDDVEGRLAAYKALTRGENVPSTGIPETFFVLTNELKSLALDVEIYDEEENNE
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatagcctatattctggaaatcgtctcagagttgatttttcaaatgttgcaaaa
gagattgatgttccaaatttattacaattacaaaaaaagagttttgatcattttttaaat
cttgataattcacaaaccgaaagcggaattgaaaaagtatttaagtcaatattcccaata
catgatcctcaaaacagacttacattagagtatgtcagcagcgaaataagtaagccaaga
tatacagttagagagtgtatggaaagagggcttacgtattgcgtaaatttaaaaattaaa
attagactgattgtacatgacagagatgaaaaaacaagtgaaaaagtcggcgtaaaagat
ataaaagaacaagaaatttttgtacgtgaaattcctcttatgacagatagaatttcattt
ataataaacggcgtagaaagagtcgtagtaaatcagcttcatagaagcccaggtgttata
tttaaagaagaagagagtccgactgtagtcaataaactaatatatacagcacaaattata
ccagatcgcggtagttggctctattttgaatatgacacaaaagatgttttatacgtgcgt
ataaataaaagaagaaaagttcctataactattctttttagagctcttggatataaaaaa
caagatatagtaaagttattttaccctattcaaacattaaatataaaaaataataaattt
ttaactatgtttaatccggatgatttttctggaagagttgattatgatataaaagatgaa
gatggaaatattttacatcaagcaggaaagagacttacaaagaaaaaagcagataagctc
attgaagatggacttaaatttgtagagtatccagtagaagttttggtaaatagatatctg
gctagtccagttatagataaagagagcggtgaagttatttatgatactttaactcagcta
gatgagaataaattagcaaaaatagtagccgagcaaaatagcatagaaatagcaaatgat
cttgcaagcggcgttgatgatgctattatcaactcatttttacaagattatgagactcta
aagctacttaagcaaactgaaggcttagaagatgaaaatgatctagctgctattagaatt
tataaagttatgcgcccaggagaaccagtagttaaagaagctgcaagaacatttgtaaat
gatctattttttaacccagaaagatatgatcttacaaaagtaggtcgtatgaaaatgaat
cataaattaggtcttagcgttcctgagtatgttactgtgcttacaaatgaagatattata
aaaactgctaaatatcttataaaagtaaaaaatggacaaggttatatagatgatagagat
cacttaggtaaccgtcgtatcagatcaatcggtgagcttttggcaaatgagcttcatttg
ggatttgtaaaaatgcaaaaagccatcagagataaatttacaagtcttagcaataacgta
gatgagcttatgccatatgatttagtaaatcctaagatgataacaacaaccataatggag
tttttcacaggcggtcagcttagtcaatttatggatcaaacaaatcctcttagcgaagtt
acacataaacgccgtttatctgctcttggcgagggcggtttagtaaaagaacgtgctgga
tttgaagtgcgtgacgtgcatccaactcactatggtagaatttgtcctgttgagactcca
gaaggtcaaaacatcggtcttatcaacactctttctacatatgcaaaagtaaatgatcta
ggatttgttgaatcgccttatagaaaggtgatagatggtaaagtcacaaatgagattgtt
tatttaacggctactcaagaagagggtcatattatagctccggcttcaactgtattagat
gcaaatgatgttataaaagaagatcttatagaagtaagacgagatggcgaaatgcttctt
gcaaaaagagaagatgttacattaatcgacctttgtagtggtatggttatgggtgtcgcc
gcttctttgataccgtttttagagcacgatgatgcaaaccgtgctcttatgggctcaaat
atgcagcgtcaagcagttccgcttcttagatctacggctcctatagtaggaactggtatg
gaagctatagttgcaagagatgcgtgggaagctataaaagctaaacgcggtggagttata
gaaaaagttgataatagaaatatatttattttaggtgaagatgaaaacggtccatatatc
gatcaatatactatggaaaaaaatttaagaaccaaccaaaatacaacttttactcaacat
cctatagttaaaaaaggtgatatagtaaaatcaggacagatcatagctgatggttcaagt
atggaaaaaggcgagttggctataggtaaaaatgctcttatagcatttatgccgtggaat
ggatataactatgaagatgctatcgtaatgagcgaaagaatgatccgcgcagatgcattt
actagtgttcatatttatgaaaaagagatcgaggctagagagctaaaagatggtgtagaa
gagataactagagatattcctaatatgaaagaagaagatcttatgcacctagatgagagt
ggtatcgtaaagataggcactcatatcaaaccaggaatgattttggtgggtaaagtttca
ccaaaaggagaggtaaagccaactcctgaagagagacttcttagagcgatattcggcgaa
aaagcaggtcacgttgtaaataaatctttatacgccggagctagtcttgagggtgtagtt
atagatgttaagatatttacaaaaaaaggctatgaaaaagacgctagatcatttaaagca
tatgaggatgaaaagaatattttagaaaaagaacatcacgatagacttttaatgcttgat
cgtgaagagatgttaagagttactgctttattatctaaaaatcctcttgagagtgagctg
gagatcggtaaaaatagctacaaaaaaggtgataagataaaaagatcagaccttgataat
gtaaatagatttactcttaacacctatgtaaagtgtttttcaaaagaaattcaaaaaaca
tatgaagatatgaaagcttatttccaaaacgagaagaaaaaattaaaagacgagcatgat
gctaagcttgaaattttagaaaaagacgatatattgccaagtggtgtagttaagctagtt
aaagtatatttagctacaaaaagaaaattaaaagtcggcgataagatggctggacgtcac
ggaaataaaggtatcgtatcaaatatagttccagatgttgatatgccgtatcttccaaat
ggacgcacggtagatatagttttaaatccgctaggtgttccaagccgtatgaatataggt
caaattttagaaagccacctaggtttaatcggtatgaaactcggtgagcagatcgaagag
atctttgaaaataaaaaagccgaatggataaaagagttaagagcgaaaatgactgagata
gcagacgtatctcgtcttatggatgctaaagttattttaagtaaaattgatgatgataag
cttatagattatgctagggattgggctagtggtgttagatttgctactcctatttttgaa
ggtgttaaagccgatgaatttaaaaaattgtttgagatggcaaaaatagatatggacggt
aaaaccgaactttatgacggacgtaccggatcaaagatggctgagcgcgttaatgtcgga
tgtatgtatatgttaaaacttcaccacttagttgatgaaaaagttcatgcaagaagtaca
ggaccatactcgctagttacgcaacaaccagtcggcggtaaagctctaagcggcggtcaa
agatttggagaaatggaagtttgggcacttgaagcttatggtgcggctcacactctaaga
gagatgctaactgtaaaatccgatgacgtagaaggtcgtttggctgcttataaagcactt
actagaggagaaaatgtaccaagtactggtattccagaaacgttttttgttttaacaaat
gagctaaaatctctagcacttgatgttgagatctatgatgaggaagagaataatgagtga
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integrated database retrieval system
