Citrobacter freundii complex sp. CFNIH3: C2U38_00020
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Entry
C2U38_00020 CDS
T06381
Name
(GenBank) XylR family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfq03000
]
C2U38_00020
Transcription factors [BR:
cfq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
C2U38_00020
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_AraC
HTH_18
Peripla_BP_4
HdcB
FAM210A-B_dom
Motif
Other DBs
NCBI-ProteinID:
AUV24165
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Position
complement(3249..4427)
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AA seq
392 aa
AA seq
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MFYKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDNIKEWLGDGV
IADYDDDDIAQLLVDVDVPIIGVGGSYHLQQDYPPVHYIATDNHALVESAFLHLKEKGIN
RFAFYGLPASSGKRWAAEREYAFCQLVAKEKYRGVVYQGLETAPENWQHAQNRLADWLQT
LPPQTGIIAVTDARARHVLQACEHLHIPVPEKLCVIGIDNEELTRYLTRVALSSVAQGAR
QMGYQAAKLLHRLLAHEEIPLQRILVPPVRVVARQSTDYRSLTDPAVIQAMHYIRNHACK
GIKVDQVLDSVGISRSNLEKRFKEEVGETIHAVIHAEKLEKARSLLISTTLSINEISQMC
GYPSLQYFYSVFKKEYDTTPKEYRDVNSEVLL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgttttataaacgtcatcgtattacgttgttatttaatgccaataaagcctacgaccgt
caggtggttgaaggggttggcgagtatctgcaagcgtcgcaatcggagtgggatatcttc
atagaagaagattttcgtgctcgcattgataacattaaagagtggttaggcgacggcgtt
attgccgattatgacgatgatgatattgcgcaattacttgtcgatgtggatgttccgatc
attggcgttgggggttcctaccatctgcagcaagattatccaccagtacattacattgcc
accgacaaccacgcgctggtagaaagcgccttcctgcatctgaaagagaaagggattaac
cggtttgcattttatggtcttccggcttcaagcggtaaacgctgggccgcagaacgtgaa
tatgcgttttgccagttggttgccaaagagaagtaccgcggcgtggtgtatcaaggtctg
gaaaccgcgccagaaaactggcagcacgcgcaaaataggctggcggactggctgcaaacc
ttacctccacaaaccgggattatcgccgtcaccgacgcacgtgcgcggcacgttctgcag
gcctgtgaacatctgcatattccggtaccggaaaaactgtgcgtcattggtatcgataac
gaagagctgacccgttacctgacacgagtcgccttgtcctccgtcgctcagggggccaga
caaatggggtatcaggcagccaaactactccaccgcctgctggctcacgaagagattccc
ctacagcgcattctggttcctcctgtacgcgttgttgcgcgtcagtctacagattatcgt
tcacttaccgatcctgccgttattcaggcgatgcattacattcgtaaccatgcctgcaaa
ggtatcaaggttgatcaagtgttggactcagtagggatttcacgttcgaatctggagaaa
cgctttaaagaagaggtcggagagaccattcacgccgtgattcatgccgaaaagctggaa
aaggcgcgcagcctgttgatttctaccacgctttcaatcaacgaaatttcacagatgtgc
ggctacccatctctgcagtatttctattcggtattcaagaaagagtacgacacgacgcca
aaagagtatcgcgatgtgaacagtgaagtgttgctataa
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