Citrobacter freundii complex sp. CFNIH3: C2U38_04050
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Entry
C2U38_04050 CDS
T06381
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Pathway
cfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2U38_04050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfq03019
]
C2U38_04050
Enzymes [BR:
cfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
C2U38_04050
Messenger RNA biogenesis [BR:
cfq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C2U38_04050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AUV24894
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All DBs
Position
complement(819663..821078)
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AA seq
471 aa
AA seq
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MTLPRCTIFTRVANFCRKVLSREEREAELAVARPHMTVIPREQHSISRKDISENALKVMY
RLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMQDLEEGIVRLIGNPETRYREDPVRMLRAVRFAAKLDMRISPETAEPIPR
LATLLNDIPPARLFEEALKLLQAGYGYETYKKLREYSLFQPLFPTITRYFTEDGDSPMER
IIAQVLKNTDNRIHNDMRVNPAFLFAAMFWYPLLEAAQKIAQESGLAYYDAFALAMNDVL
DEACRSLAIPKRLTSLTRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAYDLLALRAEVENN
AELQRLAQWWGEFQVSAPPEQKGMLNELDEEPERRRHRRPRKRAPRREGSA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgacactaccgaggtgcactatttttacccgagtcgctaatttttgccgcaaggtgcta
agccgcgaggagcgcgaggccgagctcgccgtcgcccgtccacatatgacggtaatcccg
cgtgagcagcactctatctcccgcaaagatatcagtgaaaatgccctgaaggtaatgtac
aggctcaataaggccggatacgaggcatggctggttggcggaggcgtacgcgatcttttg
ctgggcaaaaagccgaaagattttgatgtcacgactaacgccacgccagatcaggtgcga
aaactgtttcgtaactgtcgtctggttggtcgccgtttccgtctggcccatgtcatgttt
ggcccggaaattatcgaagtggcaactttccgtggtcatcatgaaggcagcgagtccgat
cgcacaacctcacagcgcggacaaaacggtatgctgctgcgcgacaacatcttcggctcc
atcgaagaagatgcccagcgtcgcgacttcacgattaacagcctgtattacagcgtggcc
gatttcaccgtgcgtgattacgttggtggcatgcaggatctcgaagagggcatcgttcgc
ctgatcggtaatccggaaacgcgctaccgcgaagaccctgtacgtatgctgcgggccgtg
cgctttgccgccaagctcgacatgcgtatcagcccggaaaccgctgagccaatcccgcgt
ctggcaacactgcttaacgatattccccccgcacgcctgtttgaagaagcactcaaactg
ttacaggcgggctatgggtatgaaacctataaaaaactgcgtgagtacagcctgttccag
ccgctgttccccaccattacgcgctatttcaccgaagacggtgacagcccaatggaacgc
atcatcgctcaggtgctgaagaataccgataaccgcatccacaatgatatgcgcgttaac
ccggcgttcttgttcgccgccatgttctggtatccgttactggaagctgcgcagaaaatt
gcccaggaaagcggtctggcttattacgatgccttcgcactggcgatgaacgacgtactg
gatgaagcctgccgctcgctggcgatcccgaaacgtctgacctcgctgacccgtgatatc
tggcagttgcagctacgcatgtctcgtcgccagggcaaacgcgcctggaagctgatggag
catccgaagttccgcgccgcttacgatctgctggccctgcgtgccgaagtggaaaacaac
gctgaactgcagcgtctggcgcagtggtggggagaattccaggtttcagcgccgccggaa
caaaaaggcatgctcaacgaactcgacgaagaaccagaacgccgtcgtcatcgtcgcccg
cgtaaacgcgccccgcgccgtgaaggttccgcgtga
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