Citrobacter freundii complex sp. CFNIH3: C2U38_05460
Help
Entry
C2U38_05460 CDS
T06381
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfq03400
]
C2U38_05460
DNA repair and recombination proteins [BR:
cfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U38_05460
Archaeal homologous recombinant proteins
C2U38_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_21
cobW
preATP-grasp_3
AAA_15
NTPase_1
zinc-ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AUV25143
UniProt:
A0A2I8S3A7
LinkDB
All DBs
Position
complement(1102872..1106018)
Genome browser
AA seq
1048 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVRGEAYRAFWSQNRARNQPEGNLQVPRVELARCS
DGKILADKVKDKLEMIAELTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKSARTELEKLQAQASGVALLAPEQLQSLTESLQVLTDEEKQYLTCQQ
AQQQHLNWLMRQNELQAEINRHQQALQAALQAQEEAQPQLAALSLALPARALRPHWERIQ
EQTATIDRTRQKIQEVNARLQSSLALRGRIRQQAQTQSAAMLAGQQTLTDWLKEHDRFRL
WSSELAGWKALLAQQSDASAQLRQWQQLRENDTRKLDALALPTLTLSAQQVTEALAQHVQ
LRPLRQRLSNLHGQIAPKQKQLAQLRATLVQRQQELAQRNAVLTEKRQRYKDKNQQLADV
RIICEQEARIKDLESQRALLQSGMPCPLCGSTTHPAIERYQTLELSVNQTRREALEKEVK
TLADEGSTLRGQLEAITQQLQRDEREVQTLSQEEQALTQEWQTVTASLNVTLQPQDDIAP
WLAAQEEHEQQLHQLSLRHTLQAQITAHTEQITQLQQHIDQRQATLTAELARHGLSLPTE
AEVASWLSERANEAQMWQQRQNELTELQARIAQLAPVLETLPETDALGENIENLSLENWR
QVHDDCLSLQGQWQTLQQQEAQDVQRAAEIQAQFDTALQASIFADRDAFVAALLDEETFN
RLEQLKQSLEGQRQQAQTLLNQAQQALATHQQQLPTGVDLTLTVQHLHDALAQLTQQLRE
NTTRQGEIRQQLKQDGENRQQQQALMLTIAKVAQQVEDWGYLNALIGSKEGDKFRKFAQG
LTLDNLVWLANNQLTRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDKMFAVDA
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctcaactccctgaagggagaatggaaagtc
gattttacggcagaaccttttgccagcaacgggttattcgccatcaccggaccaacgggt
gcggggaaaacgaccctgctggacgcaatttgccttgcgctgtaccacgaaacgccacgc
ctgaataccgtgtcacagtcgcaaaacgacctgatgacccgcgacaccgcggagtgtctg
gccgaggtcgagtttgaggtgcggggcgaagcctaccgcgcattctggagccagaaccgg
gcacgcaatcagccggagggcaatctgcaggtccctcgcgtagagctggcccgctgctcc
gacggtaaaatcctcgccgataaggtcaaagataagctggagatgatcgccgagcttacc
gggctggattacggacgttttacccgttcgatgctgctgtctcaggggcagtttgccgca
tttctcaatgccaaaccgaaagaacgcgccgagctgctggaagaactgaccggcactgag
atctacggccaaatctccgccatggtatttgaaaagcacaaatcagcgcgtacggaactg
gaaaaactgcaggcccaggccagcggtgttgcgctgttagcgccagaacagctgcaatcc
ctgacagaaagtttgcaggtacttactgacgaagaaaaacaatatcttacctgccaacaa
gcccagcagcagcacctcaactggctcatgcggcaaaatgagctacaggcggagataaac
cgccaccagcaggcattacaggctgcacttcaggcgcaggaagaggcgcagccgcaactg
gcggcgctgagtctggcactcccggccagagcgttacgcccacactgggagcgaatccag
gaacaaacggctacgattgaccgtacgcgacagaagattcaggaagtgaatgctcgctta
caaagcagcttagcgctgcgcggacgtattcgtcagcaggcacaaacgcagtcagccgct
atgctcgccggacagcaaacgttaaccgactggttgaaggaacatgaccgcttccgtttg
tggagtagcgaactggcaggatggaaagcgctactggcccaacagtccgacgccagcgcc
caactgcgccagtggcagcagttgcgggagaacgacacgcgcaagctcgatgcgctggcg
cttcccacgctgaccctttcggcacaacaggtaacggaagcgctggcgcaacatgtgcag
cttcgtccgttacgccagcggctgagtaatctgcacgggcaaatcgccccgaagcaaaag
caactggcgcagctacgcgccacgcttgtgcagcgtcagcaggagctggcccagcgcaat
gcggtgcttacagaaaagcgtcagcgctataaagataaaaatcagcagcttgccgatgtg
agaatcatttgcgagcaggaagcccggatcaaagatctggaaagccagcgggcactattg
caatccggcatgccttgcccactttgcggctccaccacgcacccggcgattgagcgctat
caaacgctcgaactgagtgtgaatcagacacggcgtgaagcgctggaaaaagaggtcaaa
acgctggccgatgagggttcaacgctacgcggtcaacttgaggcgataacccagcaactt
cagcgcgatgaacgcgaagtacaaacgctttctcaggaagagcaagcacttactcaagag
tggcagaccgtcaccgccagcctcaacgtgacgctgcaaccgcaggatgacatcgccccg
tggcttgccgcccaggaagagcacgagcagcagcttcaccaactgagtctgcgtcatacc
ctgcaagcgcaaatcaccgcacacacagagcagattactcagctccagcagcatattgac
cagcgtcaggcaacgttaaccgccgagctggcccgtcatggtctgtcccttccgaccgag
gctgaagtcgcctcatggctgagcgaacgggcgaacgaagcgcaaatgtggcaacagcgc
cagaacgaactgactgaattacaggcccgaatcgcccagcttgcgccggtgctggaaacg
ctgcctgaaaccgatgcgcttggtgaaaacattgagaatctgtcgctggaaaactggcgg
caggtgcacgacgattgcctctctttacaggggcagtggcaaaccttacagcagcaggag
gcgcaggacgttcagcgcgctgcagaaattcaggcgcagtttgataccgcattgcaggcc
agcatctttgccgatcgcgacgcctttgttgccgccctgctggatgaagagacctttaac
cgccttgaacaattgaagcaatcactggaaggccagcgacagcaggcgcaaacgctgctt
aatcaggcgcagcaggcgctggcgactcatcaacaacagctaccaaccggggtggatctc
acgctcaccgtgcaacatcttcacgacgcgctggcgcaactcacccagcagctacgggag
aacaccactcgtcagggcgaaattcgccagcagctcaagcaggatggtgaaaaccgccag
cagcagcaggcgctgatgctgacgattgcgaaagtcgcacagcaggtcgaagactggggc
tatctgaacgcactgatcggctcgaaagagggagataaattccgcaagtttgcccagggg
ctgacgctggataatctggtctggcttgccaacaaccagttgacccgtctgcacggtcgc
tatctgttgcagcgcaaggccagcgaagcgctggagctggaagtggttgatacctggcag
gccgatgccgtgcgtgacacgcgtacgctttccggcggcgagagcttcctcgtgagtctg
gcgctggcgctggcgttgtccgatctggtcagccacaaaacgcgaattgactccctgttc
ctcgacgaaggtttcggcacgttggacagcgaaacgctggataccgccctggatgcgctc
gatgcgctcaacgccactggcaaaaccattggtgtcatcagccacgttgaagcgatgaaa
gaacgcattccggtgcagatcaaggtcaaaaaaatcaacggactgggctacagtaaactc
gataaaatgtttgcagttgatgcttga
DBGET
integrated database retrieval system