KEGG   Citrobacter freundii complex sp. CFNIH3: C2U38_05460
Entry
C2U38_05460       CDS       T06381                                 
Name
(GenBank) exonuclease subunit SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
cfq  Citrobacter freundii complex sp. CFNIH3
Brite
KEGG Orthology (KO) [BR:cfq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfq03400]
    C2U38_05460
DNA repair and recombination proteins [BR:cfq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     C2U38_05460
    Archaeal homologous recombinant proteins
     C2U38_05460
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran nSTAND3 AAA_21 cobW preATP-grasp_3 AAA_15 NTPase_1 zinc-ribbon_6
Other DBs
NCBI-ProteinID: AUV25143
UniProt: A0A2I8S3A7
LinkDB
Position
complement(1102872..1106018)
AA seq 1048 aa
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVRGEAYRAFWSQNRARNQPEGNLQVPRVELARCS
DGKILADKVKDKLEMIAELTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKSARTELEKLQAQASGVALLAPEQLQSLTESLQVLTDEEKQYLTCQQ
AQQQHLNWLMRQNELQAEINRHQQALQAALQAQEEAQPQLAALSLALPARALRPHWERIQ
EQTATIDRTRQKIQEVNARLQSSLALRGRIRQQAQTQSAAMLAGQQTLTDWLKEHDRFRL
WSSELAGWKALLAQQSDASAQLRQWQQLRENDTRKLDALALPTLTLSAQQVTEALAQHVQ
LRPLRQRLSNLHGQIAPKQKQLAQLRATLVQRQQELAQRNAVLTEKRQRYKDKNQQLADV
RIICEQEARIKDLESQRALLQSGMPCPLCGSTTHPAIERYQTLELSVNQTRREALEKEVK
TLADEGSTLRGQLEAITQQLQRDEREVQTLSQEEQALTQEWQTVTASLNVTLQPQDDIAP
WLAAQEEHEQQLHQLSLRHTLQAQITAHTEQITQLQQHIDQRQATLTAELARHGLSLPTE
AEVASWLSERANEAQMWQQRQNELTELQARIAQLAPVLETLPETDALGENIENLSLENWR
QVHDDCLSLQGQWQTLQQQEAQDVQRAAEIQAQFDTALQASIFADRDAFVAALLDEETFN
RLEQLKQSLEGQRQQAQTLLNQAQQALATHQQQLPTGVDLTLTVQHLHDALAQLTQQLRE
NTTRQGEIRQQLKQDGENRQQQQALMLTIAKVAQQVEDWGYLNALIGSKEGDKFRKFAQG
LTLDNLVWLANNQLTRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDKMFAVDA
NT seq 3147 nt   +upstreamnt  +downstreamnt
atgaaaattctcagcctgcgcctgaaaaacctcaactccctgaagggagaatggaaagtc
gattttacggcagaaccttttgccagcaacgggttattcgccatcaccggaccaacgggt
gcggggaaaacgaccctgctggacgcaatttgccttgcgctgtaccacgaaacgccacgc
ctgaataccgtgtcacagtcgcaaaacgacctgatgacccgcgacaccgcggagtgtctg
gccgaggtcgagtttgaggtgcggggcgaagcctaccgcgcattctggagccagaaccgg
gcacgcaatcagccggagggcaatctgcaggtccctcgcgtagagctggcccgctgctcc
gacggtaaaatcctcgccgataaggtcaaagataagctggagatgatcgccgagcttacc
gggctggattacggacgttttacccgttcgatgctgctgtctcaggggcagtttgccgca
tttctcaatgccaaaccgaaagaacgcgccgagctgctggaagaactgaccggcactgag
atctacggccaaatctccgccatggtatttgaaaagcacaaatcagcgcgtacggaactg
gaaaaactgcaggcccaggccagcggtgttgcgctgttagcgccagaacagctgcaatcc
ctgacagaaagtttgcaggtacttactgacgaagaaaaacaatatcttacctgccaacaa
gcccagcagcagcacctcaactggctcatgcggcaaaatgagctacaggcggagataaac
cgccaccagcaggcattacaggctgcacttcaggcgcaggaagaggcgcagccgcaactg
gcggcgctgagtctggcactcccggccagagcgttacgcccacactgggagcgaatccag
gaacaaacggctacgattgaccgtacgcgacagaagattcaggaagtgaatgctcgctta
caaagcagcttagcgctgcgcggacgtattcgtcagcaggcacaaacgcagtcagccgct
atgctcgccggacagcaaacgttaaccgactggttgaaggaacatgaccgcttccgtttg
tggagtagcgaactggcaggatggaaagcgctactggcccaacagtccgacgccagcgcc
caactgcgccagtggcagcagttgcgggagaacgacacgcgcaagctcgatgcgctggcg
cttcccacgctgaccctttcggcacaacaggtaacggaagcgctggcgcaacatgtgcag
cttcgtccgttacgccagcggctgagtaatctgcacgggcaaatcgccccgaagcaaaag
caactggcgcagctacgcgccacgcttgtgcagcgtcagcaggagctggcccagcgcaat
gcggtgcttacagaaaagcgtcagcgctataaagataaaaatcagcagcttgccgatgtg
agaatcatttgcgagcaggaagcccggatcaaagatctggaaagccagcgggcactattg
caatccggcatgccttgcccactttgcggctccaccacgcacccggcgattgagcgctat
caaacgctcgaactgagtgtgaatcagacacggcgtgaagcgctggaaaaagaggtcaaa
acgctggccgatgagggttcaacgctacgcggtcaacttgaggcgataacccagcaactt
cagcgcgatgaacgcgaagtacaaacgctttctcaggaagagcaagcacttactcaagag
tggcagaccgtcaccgccagcctcaacgtgacgctgcaaccgcaggatgacatcgccccg
tggcttgccgcccaggaagagcacgagcagcagcttcaccaactgagtctgcgtcatacc
ctgcaagcgcaaatcaccgcacacacagagcagattactcagctccagcagcatattgac
cagcgtcaggcaacgttaaccgccgagctggcccgtcatggtctgtcccttccgaccgag
gctgaagtcgcctcatggctgagcgaacgggcgaacgaagcgcaaatgtggcaacagcgc
cagaacgaactgactgaattacaggcccgaatcgcccagcttgcgccggtgctggaaacg
ctgcctgaaaccgatgcgcttggtgaaaacattgagaatctgtcgctggaaaactggcgg
caggtgcacgacgattgcctctctttacaggggcagtggcaaaccttacagcagcaggag
gcgcaggacgttcagcgcgctgcagaaattcaggcgcagtttgataccgcattgcaggcc
agcatctttgccgatcgcgacgcctttgttgccgccctgctggatgaagagacctttaac
cgccttgaacaattgaagcaatcactggaaggccagcgacagcaggcgcaaacgctgctt
aatcaggcgcagcaggcgctggcgactcatcaacaacagctaccaaccggggtggatctc
acgctcaccgtgcaacatcttcacgacgcgctggcgcaactcacccagcagctacgggag
aacaccactcgtcagggcgaaattcgccagcagctcaagcaggatggtgaaaaccgccag
cagcagcaggcgctgatgctgacgattgcgaaagtcgcacagcaggtcgaagactggggc
tatctgaacgcactgatcggctcgaaagagggagataaattccgcaagtttgcccagggg
ctgacgctggataatctggtctggcttgccaacaaccagttgacccgtctgcacggtcgc
tatctgttgcagcgcaaggccagcgaagcgctggagctggaagtggttgatacctggcag
gccgatgccgtgcgtgacacgcgtacgctttccggcggcgagagcttcctcgtgagtctg
gcgctggcgctggcgttgtccgatctggtcagccacaaaacgcgaattgactccctgttc
ctcgacgaaggtttcggcacgttggacagcgaaacgctggataccgccctggatgcgctc
gatgcgctcaacgccactggcaaaaccattggtgtcatcagccacgttgaagcgatgaaa
gaacgcattccggtgcagatcaaggtcaaaaaaatcaacggactgggctacagtaaactc
gataaaatgtttgcagttgatgcttga

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