Citrobacter freundii complex sp. CFNIH3: C2U38_07445
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Entry
C2U38_07445 CDS
T06381
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Pathway
cfq00330
Arginine and proline metabolism
cfq00480
Glutathione metabolism
cfq01100
Metabolic pathways
cfq01110
Biosynthesis of secondary metabolites
cfq04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
C2U38_07445 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
C2U38_07445 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
C2U38_07445 (speF)
Enzymes [BR:
cfq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
C2U38_07445 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
ADAMTSL1
Motif
Other DBs
NCBI-ProteinID:
AUV25478
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Position
complement(1490314..1492512)
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AA seq
732 aa
AA seq
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MSELKIAVSRSCPDCFSTQRSCVNIDESNFIDVAAIVLSINDIERGKLDEIDATGYGIPV
FIATENEERVPSEHLPRISGVFECNEARTAFYGRQLETAASHYETQLRPPFFRALVDYVN
QGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGETLFRSDLCNADVAMGDLLIHEGAPCIAQ
QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPYGFIGGIDAHCFEEGYLREQVSEVAPQRSKDERPFRLAVIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGF
SQTSQIHKKDSHIKGQSRYVPHKRMNNAFMMHASTSPFYPLFAALDINAKMHEGVSGRNM
WMDCVVNGIDTRKLILENCHHIRPFVPEIVEGKPWQAYPTAEIASDLRFFHFVPGEHWHA
FEGYAEHQYFVDPCKLLLTTPGINARNGEYDTFGVPATILANFLRENGVVPEKCDLNSIL
FLLTPAEDMAKLQQLVALLVRFEKLLEADAPLAEVLPSIYKQHEARYAGYTLRQLCQEMH
DLYARHNVKQLQKEMFRKAHFPRVSMNPQDANYAYLRGEVELVRLPDAEGRIAAEGALPY
PPGVLCVVPGEIWGGSVLRYFSALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKQQ
SAQHALLKGEML
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattaaaaattgccgtaagccgttcctgtcctgattgtttttctacgcagcgt
tcttgcgtaaatatcgatgaaagtaattttattgatgttgctgctatcgtgttatccatc
aatgatattgaacgtggaaaactcgatgaaattgacgccaccggctatgggattcctgtt
tttatcgccaccgaaaatgaagaacgtgttccatctgaacatctgccgcggatctcaggt
gtattcgaatgtaatgaagcccgtaccgccttttatggccggcagttagaaaccgccgcc
agccattatgaaacgcagttacgtccgccgttcttccgtgcgcttgtcgactatgtcaat
cagggtaacagcgcctttgattgtcctggtcatcaggggggcgagtttttccgtcgccat
cctgcgggtaatcagtttgtcgaatatttcggcgaaacacttttccgctccgatttgtgt
aatgccgatgtcgcaatgggtgatctgctgattcacgaaggcgctccctgcatcgcacaa
cagcacgcagctaaagttttcaacgcggataagacctactttgtactgaacgggacctcc
tcatcgaacaaagtggtgcttaacgcattgctcaccccaggcgatctggtgttattcgac
cgcaacaaccacaagtcaaaccaccacggcgcgttattgcaggccggggcaacgccggta
tatctggaaaccgcgcgtaacccgtacggctttatcggcgggatcgacgcgcactgcttt
gaagaaggctatctacgtgaacaggtgagtgaagttgcgccacaacgttcgaaagatgag
cgtccgttccgtctggccgtgattcagttaggtacctacgacggcacaatctataacgcc
cgtcaggtggtggataagatcggtcatctgtgcgactacatcctgtttgactccgcgtgg
gttggctatgagcagtttattccgatgatggccgattgctctccgctgttgctggatctt
aacgaaaatgaccccggtattctggtcacccagtcagtgcacaaacaacaggcaggcttc
tctcagacttcgcagatccacaaaaaagacagccatattaaaggccagtctcgctacgtg
cctcataaacgaatgaataacgcgttcatgatgcacgcctccaccagcccgttctatccg
ctctttgccgcactggacatcaacgccaaaatgcatgaaggcgtcagcgggcgcaacatg
tggatggactgcgtcgtcaacggaattgatactcgtaagttgatcctggaaaactgccac
catatccgcccgttcgtgccggagatagtagagggtaaaccgtggcaggcttatcccacc
gctgaaatcgccagcgacctgcgtttcttccattttgtccccggtgaacactggcatgcc
tttgaaggatatgccgaacaccagtattttgtggatccatgcaaattgctgctcaccact
ccgggtattaatgcgcgtaacggcgaatacgataccttcggcgttccggctaccattctg
gctaacttcctgcgcgaaaatggtgtggtgcccgaaaaatgcgacctcaactccatcctg
ttcctgctgacccccgcagaggatatggcgaagttgcagcagcttgtcgccctgctggtg
cgtttcgaaaaactgctggaagccgatgccccgctagccgaggttctgccctcgatctac
aagcagcatgaagcccgttacgccggttacaccctgcgccagctgtgccaggagatgcac
gatttgtatgcgcgtcacaacgtgaagcagctacagaaagagatgttccgtaaggcacat
ttcccgcgcgtcagcatgaatccccaggatgccaactatgcatatctgcgtggtgaagtt
gaactggtgcgtctgccggacgctgaaggtcgcatcgcggcagaaggcgcgctgccttat
cctccgggcgtgctgtgtgtggttccgggtgaaatctggggcggttcggtattacgttac
ttcagcgcactggaagaaggaatcaatttgctaccgggttttgcgcctgaactccagggt
gtctacatcgaagaacacgacggtcgtaaacaggtgtggtgctacgtgattaagcaacaa
agcgcgcaacacgctctgttgaaaggggaaatgttatga
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