Citrobacter freundii complex sp. CFNIH3: C2U38_07490
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Entry
C2U38_07490 CDS
T06381
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfq03400
]
C2U38_07490
Enzymes [BR:
cfq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
C2U38_07490
DNA repair and recombination proteins [BR:
cfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
C2U38_07490
Prokaryotic type
C2U38_07490
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AUV25486
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Position
1501573..1502991
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AA seq
472 aa
AA seq
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MTTHLVWFRRDLRLHDNLALAAACRDRTAQVIALYISTPEQWKAHEMAPRQAAFVSAQLN
ALKAALAEKGIPLLFDEVADFATSVETVKNVCAQHSVSRLFYNYEYEINERQRDVAVEKA
LPHVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRIKEGVPECVSAPKVRESGA
LDAPLTSITLSYPQQDFDTQRFVAEEKLAIAQLRQFCQQAAREYEQQRDFPAVDGTSRLS
ASLATGGLSPRQCLNRLLAEQPQALEGGEGSVWLNELIWREFYRHLMTYHPALCRHQPFI
RWTDRVQWQNNPAHLHAWQTGNTGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRKGEQYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDRDGEFIRQW
LPELRDVPGKAIHDPWTWAEKAQVTLNYPRPIVDHKQARLATLAAYEAARKG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatctggtctggtttcgacgtgatttacgtctgcatgacaacctcgcgctg
gcggcggcttgtcgggatcgtactgcgcaggtcatcgcgctatatatctctactcctgag
cagtggaaggcgcacgaaatggccccacgtcaggcggcatttgtgagtgcgcagttgaat
gcgttgaaggcggcgctggcggaaaaaggcatcccgcttctgtttgatgaagttgcagat
tttgcgaccagcgtggaaaccgtcaaaaacgtctgcgcacagcatagcgtcagccgattg
ttttataactatgaatacgaaataaacgaacgtcagcgtgatgttgccgttgagaaggca
ttaccccatgtggtgtgtgaagggtttgatgacagcgtgatcctgcctccaggggcggtc
atgaccggcaatcacgaaatgtataaagtctttacaccgtttaaaaatgcctggctgaag
cggattaaagagggtgttccagaatgcgttagcgcgccgaaggtgagagaaagcggcgct
cttgacgctccgttaacatcaataacgctgagctatccgcagcaagattttgatacgcag
cggtttgtggcagaagaaaaactggctatcgcgcaattacgccagttttgccagcaggcc
gcgagagaatatgagcaacagcgtgatttccccgcggttgacggtaccagtcgattatcc
gcaagcctggcgacagggggattgtcgccgcgccagtgcctgaatcgactgctcgcggag
cagccgcaggcgcttgaaggaggggaaggcagcgtctggctgaacgaacttatctggcgt
gaattttatcgtcatctgatgacttaccatccggcgctgtgtcggcatcaaccgtttatc
cgttggaccgatcgcgtgcaatggcagaataatccggcacatttgcatgcctggcaaaca
gggaacacgggatacccgattgtggatgcggcgatgcgtcagctcaacgccacgggctgg
atgcataatcgattacgcatgattacagccagttttttagtgaaagatctgctgatcgac
tggcgtaaaggcgagcaatattttatgtcgcaactgatcgatggcgatctggcggccaat
aacggcggctggcagtgggcggcctcaaccgggaccgacgccgcaccgtatttccgtatc
tttaaccccacgactcagggcgaaaaatttgaccgcgacggtgagtttatccgccagtgg
ctgccggaactgcgcgatgtgccgggtaaagccattcatgacccgtggacatgggctgaa
aaagcgcaggttacgcttaactatcctcgtccgattgtcgatcataaacaggcaagactg
gcgacgctggcggcctatgaggcggcgcgcaagggataa
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