Citrobacter freundii complex sp. CFNIH3: C2U38_10315
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Entry
C2U38_10315 CDS
T06381
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfq03016
]
C2U38_10315
Enzymes [BR:
cfq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C2U38_10315
Transfer RNA biogenesis [BR:
cfq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2U38_10315
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AUV25986
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All DBs
Position
2050117..2051244
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AA seq
375 aa
AA seq
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MNYQMITTDDALATLCEAVREFPAIALDTEFVRTRTYYPQLGLIQLFDGKHVALIDPLGI
TDWSPLRDILRDTTITKFLHAGSEDLEVFLNAFGELPQPLIDTQILAAFCGRPLSWGFAS
MVEEFTGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPITTKLMAETEASGWLPAAL
DECRLMQQRRQEILAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVR
EEHLWAVARYMPGSLGELDSLGLSGSEIRFHGKTLIALVEKAQALPEESLPQPLLNLMDM
PGYRKAFKAIKALVAEVSAEHNLSVELLASRRQINQLLNWHWKLKPQQSLPELVSGWRGE
LMSDRLNALLQEYPQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcaaatgatcaccacggacgacgcgttagccacgctgtgcgaagccgtccgt
gaatttccggcgatagccctggataccgaatttgttcgcacacgtacctattatccgcag
ttggggctgatccaactgtttgatggcaaacacgttgctctgattgatccgctagggatc
accgactggtcgcccctgcgcgatattctgcgtgataccaccatcaccaaattcctgcat
gcgggaagtgaagacctggaagtgtttctcaacgcttttggcgaacttccgcagccgtta
attgacacacaaatcctggccgcgttttgcggtcgtccgctgtcgtggggcttcgcctcg
atggtggaagagtttacgggtgtggcgctcgacaaaagcgaatcgcgtaccgactggctg
gccagaccgctgaccgagcgtcagtgcgaatacgcggcggctgacgtctggtatctgtta
ccgatcaccacaaaactgatggctgaaaccgaagccagcggctggctgccagctgcgctg
gacgaatgccgcttaatgcagcagcgtcgccaggagattctggcgccagaagacgcctgg
cgtgacatcaccaacgcatggcaactgcgcacccgtcagctagcctgcctgcaattgctt
gccgactggcgactgcgtaaagcacgcgagcgcgatctggcggtaaacttcgtggtgcgt
gaagagcacctgtgggcggtggcgcgttatatgccgggcagcctgggtgaactggatagc
ctgggtctttccgggagtgaaattcgtttccacggtaaaacgctgatcgccctggtggaa
aaggcacaggctttaccggaagagtcgctaccgcagccgctgctgaatttgatggatatg
ccagggtatcgcaaagcgttcaaagccatcaaagcgctggttgccgaggtgagtgcggaa
cataatctcagcgtcgaactgcttgcttcgcgtcgccagatcaaccagttgctcaactgg
cactggaaattaaagccgcagcaatccctgccagagctggtttccggctggcgtggcgaa
ttgatgtccgatcgcctcaacgcgctgctgcaggaatacccgcagtaa
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