Citrobacter freundii complex sp. CFNIH3: C2U38_11225
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Entry
C2U38_11225 CDS
T06381
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Pathway
cfq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C2U38_11225
Enzymes [BR:
cfq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
C2U38_11225
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
GCH_III
Motif
Other DBs
NCBI-ProteinID:
AUV28935
LinkDB
All DBs
Position
complement(2239678..2241669)
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AA seq
663 aa
AA seq
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MKDVRELVTLYSYVGTHNPYWRLSEDCNILHFSIDEASEADQTIELLPEQADRIREMTVI
TSSLLMTLPIEDDDIPVHLVGRKINKREWAGSASAWDDTPSVARDLAYGLSFAEQVVSEA
NSVIVILDRMGNIQRFNRLCEEYTGLKEREVIGQSVFTLFMSRREAAASRRNIEVFFREG
NSYEVERWVKTCKGQRLFLFRNKFVHNGSGKNEIFLICSGTDITEERRAQERLRVLANTD
SITGLPNRNAIHELISNAIENAGDTQVGIAYLDLDNFKKVNDAYGHMFGDQLLQSVSLAI
LSCLEDNQILARFGGDEFIVLATETSQGTLEATASRILTRLRQPFRIGLIEVYTGCSIGI
SLAPQHGQDCESVIRNADTAMYTAKEGGRGQFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVV
RQVAKWRDKGINLRVAVNVSARQLADQTLFTALKQVLHELNFEYCPIDVELTESSLIENE
QLALSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPLDAIKLDQTFVREIHKQSISQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWYRRHLSK
KLR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtccgggagctggttacgttgtatagctatgtgggcactcataacccctac
tggcgtttgtcagaggattgcaacatcctgcatttctctatcgacgaagcgtcagaagct
gatcagaccatcgaattattacctgaacaagccgatcgcattcgcgagatgacggtgatc
acgtcaagtctgttaatgacgttgcccattgaagatgacgacattcccgtgcatctggtc
ggtcgaaaaatcaataagcgcgaatgggccggtagcgcatccgcctgggatgacacccct
tccgtcgcccgcgatctggcctacggcctctcttttgccgaacaagtcgtttccgaagcc
aattccgttattgtcattcttgaccgcatgggcaacattcagcggtttaatcgcctgtgc
gaagagtacaccggcctcaaagaacgtgaagtcattggtcaaagtgtattcacattattt
atgagccgtcgtgaagcagcggcttcacggcgcaatattgaggtcttttttcgcgaaggt
aactcgtatgaggttgaacgctgggtcaagacctgcaaaggccagcgtctgtttctgttt
cgcaataaatttgtgcataacggtagcggcaagaacgaaatttttctgatctgttccggg
accgatatcactgaagaacgccgcgcgcaggaacgactgcgggtgttggcgaataccgac
tccatcactggattaccaaaccgcaacgcaattcatgaactgatcagcaatgcgattgag
aacgcgggcgatacgcaggtcggtattgcgtacctcgatctggataacttcaaaaaggta
aacgatgcctacgggcatatgtttggcgatcagctactacaaagcgtgtcgctggcaatc
ctcagttgcctcgaagacaaccagatcctggcgcgatttggcggcgatgaattcattgtt
cttgccaccgaaacatcccagggcacactggaagccaccgcatcacgcattctgacgcgc
ctgcgccagcccttccgcatcggtctgattgaagtctataccggatgctctattggtata
tccctcgcgcctcagcatggtcaggactgcgagagcgtcattcgtaacgcggatacagcc
atgtacaccgcgaaagaaggcggccgtgggcagttttgtgttttttctccggaaatgaat
cagcgggtatttgaatatctgtggctggatactaatctgcgtaaggcactggataacgat
caactggttatccattatcagccaaagataacctggcgcggtgaagtgcgcagcctggag
gcgctggttcgctggcaatctccggaacgcggcctcattccaccgctggagtttatatcc
tacgccgaagaatcggggctcatcgtcccgctggggcgttgggttattctcgacgttgtg
cgccaggtcgcgaaatggcgtgacaagggaataaacctgcgcgtggcggtaaacgtttct
gcccgccagctcgccgaccagacgctttttaccgcacttaagcaggtgcttcacgagctc
aactttgagtattgccccatcgatgttgaattaacagaaagcagtttgatagaaaatgag
caactggcgttgtcagtcattcagcagtttagccagttaggtgcgcaaatccatttggat
gattttggtaccggttattcgtcgctgtctcaactggcccgcttcccgctagatgccatt
aaactggatcagacctttgtcagagagatccacaaacaatccatttcacaatcgctggta
cgggccatagttgcggtagcacaggcgctcaacctgcaggtcatcgccgaaggcgtggaa
agcgcgaaagaggatgcgtttctgaccaaaaatggcgtcaatgagcgtcaggggttttta
ttcgccaaaccaatgccagcagccgcatttgaacgttggtatcgccgccacctgagtaaa
aaactgcgctaa
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