Citrobacter freundii complex sp. CFNIH3: C2U38_17400
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Entry
C2U38_17400 CDS
T06381
Name
(GenBank) helicase
KO
K19789
DNA repair protein RadD
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfq03400
]
C2U38_17400
DNA repair and recombination proteins [BR:
cfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
C2U38_17400
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
AAA_22
AAA_30
DZR
Cas12f1-like_TNB
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AUV27252
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Position
complement(3466505..3468034)
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AA seq
509 aa
AA seq
DB search
MLNIQPREKQIVALNMLRGAWKQNNSFMLYAPVGFGKTAIAALITDGFVSREMRVMFVAP
YTVLLDQTATRFMEYGLPGEEISYVWRDHPSYNPTALIQIASADTLIRREFPDNIDLLIV
DEAHLKRKKLLEVIDNLTRNTKTKVVGLSGTPFAKFLGNYYQRLIKPTTMKELIAIGALS
KYEFYAPSHPDLSEVETSYVAGYGSDYKEVQLSKVMSEAKLVGDIVKNWLENGQDRPTIC
FCVDVAHANYVTMEFSRTGVTVEVMTASTPHEERQLTIRRFEQGITKIIINVGVLVAGFD
SDVRCIIFARPTKSEIRWIQTLGRGLRAAPGKDHCLIFDHSGTVNKLGYPDDIEYDYLPS
SSDGMEEAPQRVTKTDEPEKLPKECSQCHYVKPAGIYICPKCGFKPLAGEDVETDKSRGL
TKVSKAEVKYTPEQKQSWWSQILFYQRTRAAQGRPVSDGWCAHTYRQKFGVWPRGLHHTP
QQITPEVTNFIKSKLIAFAKRKEKQGEAA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacatccagcctcgcgagaaacaaatcgtcgcgctcaacatgctgcgcggcgca
tggaagcagaataattcgttcatgctctatgccccggttggtttcggcaaaacggctatt
gccgcgctgatcactgatggctttgtcagccgcgaaatgcgcgtaatgtttgtggccccg
tatacggtactgcttgaccagacggctacccgattcatggaatatggtcttcctggcgaa
gagatcagttatgtctggcgtgatcacccgtcatataacccgacagcgcttattcagatt
gccagtgccgatacgctcattcgtcgtgaattcccggacaacatcgacctgctgatcgtt
gacgaagcccacctgaagcgcaaaaagttgctggaggttatcgacaacctgacccgcaac
acaaaaacgaaggtggtcggtctttccggtacgcctttcgccaagttcctgggcaattac
tatcagcgcctgattaagccaacaacgatgaaggaactgatcgcgattggcgcactgagc
aaatacgaattttacgcgccgtcacatcccgatctctctgaggtggaaacgtcttacgtt
gctggttatggcagcgattacaaggaagtccagctcagtaaggttatgagtgaagccaag
ctggttggcgatattgtaaaaaactggctggagaacgggcaggatcgcccaacaatctgt
ttctgcgttgatgtggcccatgctaactacgtcacgatggagttttcccgaactggggtg
actgtagaagtcatgacggcaagcacaccacatgaagaacgtcagttgacgatccgtcgc
ttcgagcagggcattaccaaaatcatcatcaacgttggtgtactggtagccgggttcgac
agtgatgttcgttgcatcatctttgcccgaccgaccaaaagtgaaattcgctggattcag
acgcttgggcgtggattacgcgcggcccctggcaaagatcactgtctcatcttcgaccac
agcggcacagtcaacaagctgggttatcccgatgacattgaatatgactacctcccttcg
tcgtctgacggcatggaagaagccccgcagcgtgttaccaagacagacgagccggagaaa
ctgccgaaagagtgcagccagtgccattacgtgaaacctgccggaatttatatctgcccg
aaatgtgggtttaaaccgctggccggggaagacgttgaaacagacaaatcccgtggactg
accaaggtcagcaaagcggaagttaaatacaccccagagcagaaacaatcctggtggtct
cagattcttttctatcagcgcacccgcgcagcacagggacgccctgtcagtgacggatgg
tgtgcgcatacctatcgccaaaaattcggtgtatggccgagagggttacatcacaccccg
cagcaaatcacacctgaagtgacgaatttcatcaaatcaaaactaatcgccttcgcgaaa
cggaaagagaaacaaggggaagccgcatga
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