Citrobacter freundii complex sp. CFNIH3: C2U38_18675
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Entry
C2U38_18675 CDS
T06381
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfq03009
]
C2U38_18675
Enzymes [BR:
cfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C2U38_18675
Ribosome biogenesis [BR:
cfq03009
]
Prokaryotic type
rRNA helicases
C2U38_18675
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AUV27479
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All DBs
Position
3721779..3723107
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLDALQEKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVAEHARELAKNTHLDIATITGGVAYMNHM
EVFSENQDIVVATTGRLLQYIKEENFDCHAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSADPSTRERKKIHQFYYRADDIEHKTALLI
HLLKQPEATRSIVFVRKRERVHELAGWLRQAGINNCYLEGEMVQNKRNEAIKRLTDGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDAYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKASRYIDEPLKARVIDELRPTTRAPSEKSNGKPSKKVLAKRAEQKAKEKEKPRVKKRHR
DAKNVGKRRKPSGAATQQSDKE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagccttctggatgccctccag
gaaaaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatatttgctg
ccagcgttgcagcacctgctcgacttcccgcgcaagaaatctggcccgccgcgcattttg
attttgacaccgacgcgcgaactggcgatgcaggttgccgaacacgcccgtgaactggcg
aagaatacgcatctggatatcgccacgattaccggcggcgtggcttacatgaaccacatg
gaagtctttagcgaaaaccaggacatcgtggtcgccactaccggtcgtctgctgcagtac
attaaagaagaaaacttcgactgccatgcggttgagacactaatcctcgatgaagcagac
cgcatgctggacatgggctttgcccaggacatcgagcatatcgctggagaaacccgctgg
cgtaagcaaactatgctgttctccgccacgctggaaggagatgcgatcaaagattttgct
gagcgtctgctggaggatccggtcgaagtttcggcggatccgtctacccgcgaacgcaag
aagattcatcagttttactaccgtgccgatgacatcgagcacaaaactgccctactgatc
catttgttaaaacagccggaagcgacccgctcgattgtcttcgtacgtaaacgcgagcgt
gtgcacgagctggcaggctggctgcgccaggcgggcattaataactgctatctcgaaggc
gagatggtgcagaacaaacgtaatgaagcgatcaaacgcctgaccgatggtcgtgtgaac
gtgctggtagcaaccgacgttgccgctcgtgggatcgatattcctgacgtcagccacgtg
tttaacttcgacatgccgcgcagtggcgatgcctatctgcaccgcattggccgtaccggt
cgtgcaggccgtaaaggtactgcgatctctttggttgaagcccacgaccatctgctgctc
ggcaaagcgagccgctacattgacgagccactgaaagcacgcgtcatcgacgaactgcgt
ccaaccacgcgcgcgccaagtgagaaatctaacggtaagccatccaagaaagtgctggcg
aagcgcgccgagcaaaaagcgaaagagaaagagaaaccgcgggtgaaaaaacgtcaccgc
gacgccaaaaatgtcggcaaacgccgtaagccgagcggagctgctacccagcagtccgac
aaagagtaa
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