Citrobacter freundii complex sp. CFNIH3: C2U38_19940
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Entry
C2U38_19940 CDS
T06381
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfq03016
]
C2U38_19940
Enzymes [BR:
cfq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
C2U38_19940
Transfer RNA biogenesis [BR:
cfq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C2U38_19940
Prokaryotic type
C2U38_19940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AUV27680
LinkDB
All DBs
Position
3978274..3979323
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AA seq
349 aa
AA seq
DB search
MTVFDDLTYLHGKPLGHGVLKANPEDFVVVEDLGFEPDGEGEHVLVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSKFELEGCKVLEYARHKRK
LRLGALKGNEFTLVLREVSERNDVEARLQAISERGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDFNQVVDGDALQLSGRGSWFVATQEE
HTELQRRVDEKELMITAALPGSGEWGTQRDALAFEKAAVADETALQSLLLREKVDASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAYIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgtttgacgatctgacgtatctccatggcaaaccactgggccatggcgtcctg
aaagcgaatccggaagactttgttgtcgtcgaagatttaggcttcgaaccggatggcgaa
ggcgagcatgttttggtgcgcatcctgaaaaacggttgtaacacccgttttgtggctgac
gcgctggcgaaattcctgaaaattcacgcgcgtgaagtgagctttgccgggcagaaagat
aagcatgcggtcacggaacagtggctgtgcgcgcgcgtaccgggcaatgcaatgcctgat
ctaagcaaatttgagctcgaaggctgtaaagttctggagtacgcgcgccacaagcgtaag
ctgcgtttaggggcgctgaaaggcaacgaatttacgctggtgttgcgtgaagtgagcgag
cgaaatgacgttgaagcgcgtttgcaggcgattagcgaacgcggcgtaccgaactatttt
ggcgctcagcgttttggtatcggcggtagcaacctgcaaggggcgctgcgctgggcacaa
agcgatgcgccggtgcgcgatcgcaataaacgcagtttttggttgtcggcggcccgtagc
gcgttgtttaatcagatagtcagtgaacgcttgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattatccggacgcggaagctggtttgtcgccacacaggaagaa
cacactgaattacagcgtcgcgtcgatgagaaagaattaatgatcacagcggcattaccg
ggcagcggtgagtggggaactcagcgcgacgcgctggcgtttgaaaaagccgctgttgct
gatgaaaccgcgctgcagtctctgttattgcgcgagaaagtcgacgcgtcgcgtcgcgct
atgttgctgtatccacaacaattaagctggaactggtgggatgacgtaaccgtcgagtta
cgcttctggctaccggcaggtagcttcgccaccagtgttgtaagggaacttattaacaca
atgggtgattatgcgtatattgctgagtaa
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