Citrobacter freundii complex sp. CFNIH3: C2U38_20325
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Entry
C2U38_20325 CDS
T06381
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Pathway
cfq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2U38_20325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfq03400
]
C2U38_20325
Enzymes [BR:
cfq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2U38_20325
DNA repair and recombination proteins [BR:
cfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U38_20325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Helicase_RecD
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_28
MukB
Herpes_Helicase
UvrD_C
FtsK_SpoIIIE
CbiA
FAM212
DO-GTPase1
DUF6079
DEAD
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AUV27750
LinkDB
All DBs
Position
complement(4065921..4067741)
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AA seq
606 aa
AA seq
DB search
MTIQKRLLEAVEQKQLRPLDAQFALAVAGNDNPAVALAAALLSREAGEGHVCLPLSRLSL
SEDAHPLLSAWLAEVGEPEDWTECLLASGAVSRGEQPTPLVLHGDRLYLNRMWHNERAVA
RFFSEVNHAIEVDEQRLTHTLAALFPPAEGVNWQKVAAAVALTRRISVISGGPGTGKTTT
VARLLAALIQMAEGERCRIRLAAPTGKAAARLTASLGAALRELPLTEEQKKRIPDDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDRDQ
LASVEAGAVLGDICAFVGDGFTPERARQLSRLTGSAIPAGPGTQAAALRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKAALKTVFQQGFSDIEKRTLHSSEDYAAMLDEALAGYGHYLD
LLREGAEPDAVIQAFNEYQLLCALREGPFGVGGLNERLEQVMAQKRKIHRSTHSRWYEGR
PVMIARNDSSLGLFNGDIGIALDRGQGLRVWFALPDGSIKSVQPSRLPEHETTWAMTVHK
SQGSEFDHAALILPSQHSPVVTRELVYTAVTRARRRLSLYADERILSNAIATRTERRSGL
SALFNQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccagaaacgattactggaggctgtggagcaaaaacagctccggcctctggat
gctcagtttgcgctggcggttgccggaaatgataaccctgccgttgcgctggcggcggcg
ttgctcagtcgtgaagcaggagaagggcacgtctgcttaccactttcgcggttatccctg
agcgaggacgcccatccccttttaagcgcctggctcgctgaagtaggggagccagaagac
tggacggaatgtctgctggcctccggggcggtaagccgtggtgagcaacccacgccgctg
gtgctgcacggcgatcgcttgtatctgaaccggatgtggcataacgaacgggcggtggct
cgctttttcagtgaagttaaccacgccattgaggtggatgaacaacggcttacccacacg
ctggcggcgttgtttccaccagcggaaggtgttaactggcaaaaagtggccgctgcggtg
gcgttgacccgtcgtatatcggtgatctccggcgggccggggaccggaaaaacgacaaca
gttgcgaggcttctggcggcgttgattcagatggcggagggagaacgctgccgtattcgt
ctggcggctcctactggaaaggcggcagcgcgcctgactgcctcgctgggcgcagcgcta
cgagaactgccgttaaccgaagagcaaaagaaacgcattcccgatgacgccagtacgttg
catcgattattaggcgctcagccaggcagtcagcgcctgcgccatcatgcgggaaacccg
ctgcatctggatgtgctggtggtggatgaagcctcgatgattgatttgccgatgatgtcg
cgccttatcgatgcgctgccgccgcacgggcgggtgatttttcttggcgatcgtgaccag
ctcgcttccgtcgaagcgggggcggtgctgggggatatctgtgctttcgtcggtgacggg
tttaccccggaacgcgcccgccagctcagtcgtctgaccggaagcgctattccggcaggt
ccgggaactcaggccgccgctttgcgcgacagtttgtgtctgctgcaaaagagttaccgt
ttcggtagcgattccggaatcggtcagttggctgctgcgattaatcgtggtgacaaagcc
gcgctaaaaacggtcttccagcaggggtttagcgacatcgaaaaacgcacgctacatagc
agcgaagattacgccgcgatgttggatgaggcgctggcgggttatgggcactatctggat
ttactgagagagggcgctgagccggatgccgtcattcaggccttcaatgagtatcagctg
ttgtgtgccctgcgtgaaggtccgtttggcgtgggtggtttgaatgaacgccttgagcaa
gtgatggcgcaaaaacgtaaaattcatcgttcaacgcatagccgctggtatgagggaagg
ccggtgatgatcgcgcgcaatgacagttcgctgggattatttaacggtgatatcggcatt
gccctcgatcgtggacagggcctgagggtgtggtttgcgctgccggacggttctatcaaa
tcagtccagcccagtcgcttacctgaacatgaaaccacctgggcgatgaccgtgcacaaa
tcgcagggatctgagtttgaccatgcggcgttgattttacccagccagcattcacccgtg
gttacccgcgagctggtctataccgccgttacccgcgcgcgccggcgtctgtcactgtat
gccgatgagcggatattaagtaacgccattgccacccgcaccgaacgtcgcagcggattg
tcggcgttgtttaatcaataa
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