Citrobacter freundii complex sp. CFNIH3: C2U38_20340
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Entry
C2U38_20340 CDS
T06381
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Pathway
cfq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2U38_20340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfq03400
]
C2U38_20340
Enzymes [BR:
cfq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2U38_20340
DNA repair and recombination proteins [BR:
cfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U38_20340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AUV27753
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All DBs
Position
complement(4074344..4077712)
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AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFSIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDGDDFALLRHYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPEWLTQWEAGRLVEGLGESQAWQAPLWKALVEHTEELG
QPRWHRANLYQRFIQTLESASECPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAWLAKLMARQRRHSFEERHLPLFRDSQKAEGVFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQSDILELESHAVAGVTLEEYSR
SDNKRRLELNDTSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQSVFGSAPAERYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNINEEGLRYLRLWVNESGIRWGIDDDNVRELELPPTGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESNGLIAELVGHLASLLMQLNLWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIITEGLGAEYGDAIPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDESLTCDQSEARVKAHI
TRLHTRMPFDAQNYLPGEQQSYAREWLPAASLSGKAHTDFVQTLPFEMPEALTLETLQRF
WAHPVRAFFQMRLRVNFRSEESEIPETEPFTLEGLTRYQLNQQLLNTLVEEKDAEQLFRR
FRAAGTLPYGPFGEILWDTQRQEMQSLAERIIACRQPCQSMEIDLNCNGVQITGWLPQVQ
EDGLLRWRPSLISIAQGVQLWLEHLVYCASGGTGESRLFLRKDGEWRFPPLDAEQALLYL
SQLIDGYREGMSSPLLVLPESGGAWIKTCYDAVNDAMLDDDATLQKARSKFLQAYEGNMM
VRGEGDDIWYQRLWRQLDAATLETIVLQSQRYLLPIFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttaatggaatttatc
gttgagcgcgagcggctggacgacccctttgaacctgagatgatcctggttcaaagtacc
ggtatggcgcagtggctacaaatgacccttgcacagaagtttagtattgccgccaacatc
gattttccgctgcccgcgagttttatctgggatatgtttgtgcgcgtgctgccggatatc
ccgaaagagagcgcgttcagcaaacagagcatgagctggaagttgatgacgctgttgccg
caattgctggatggcgatgacttcgcattgctgcgccactatctgacggacgacaccgat
aaacgtaagctgtttcagctttcctcgcgcgcggctgacctcttcgaccagtatttagtc
tatcgacctgagtggttgacccagtgggaagccgggcgactggttgagggactcggcgaa
tctcaggcctggcaggcgccgttgtggaaagcgctggtggaacacaccgaggaattgggc
cagccgcgctggcatcgcgccaatttataccaacgatttattcagactctggaaagtgcg
tccgagtgcccgcagggactgccttctcgcgtctttatttgcggcatttcagcgctgccg
ccggtttatttgcaggcattgcaggcgctgggcaagcacattgatattcatctgctgttt
accaacccttgtcgctactactggggagatataaaagatcccgcctggctggcgaagctg
atggcgcgtcagcgtcggcacagctttgaagaacgccatctgccgctgtttcgcgatagt
cagaaagccgaaggggtgtttaacagcgatggtgaacaggatgtgggcaacccgatgctg
gcctcgtggggcaaactggggcgcgattacatttatctgctttcagaactggaaaatagt
caggagctggatgcgtttgtcgatataacacctgacaatcttttgcataatattcaatcg
gatattctggaacttgaaagccatgccgtggcgggcgttacgctggaagagtattcgcgt
agcgacaataaacgacggcttgaactgaacgacaccagcgtgactttccatgtttgtcat
agcccacagcgcgaggtagaaattcttcatgaccgcctgctggcaatgctggaagcggat
cccacgctgacgccgcgcgatattattgtgatggtggcggatatcgacagctacagccca
tttattcagtcggtctttggcagcgcgccagctgagcgttacttaccatatgcgatttcc
gaccgtcgggcgcgccagtctcatcccgtcttacaggcctttattagcctgctgtcgctg
ccggatagccgttttgtctcagaggatgtgctggcattactggatgtgcccgtgctggcg
gcgcgtttcaatatcaatgaagaagggctgcgctatcttcgtttatgggtcaatgaatcc
gggattcgctggggaattgacgacgataacgtgcgtgaactggaacttccgcctactggt
cagcatacctggcaatttggtttaacgcgcatgctgctcggctacgcgatggaaagcgcg
cagggcgagtggcaatcggtattgccatacgatgagtccaacggtttgattgccgagttg
gtagggcatctggcctcgttgctgatgcagctcaatctctggcgtagagggttagcgcag
gagcgcccgctggaagagtggctgcccgtttgtcgggacatgcttaatgatttcttcctg
ccggatgcagataccgaagcggcgatgacgctgattgaacagcagtggcaggccattatc
actgaaggtctgggggctgagtatggtgatgccataccgctttctctattgcgtgatgag
ctggcccagcgtcttgaccaggagcgcattagccagcgcttcctggcggggccagttaac
atttgtacgctgatgccgatgcgctctattcctttcaaggtggtgtgcctgctgggtatg
aacgatggcgtttatccgcgtcagcttgcgccgttgggctttgatttgatgagtcaaaaa
ccgatgaggggcgatcgcagccgtcgcgatgatgaccgctacctgtttcttgaagcattg
atttcagcacagcaaacgctctacatcagctacattggccgctccattcaggacaacagc
gagcgcttcccgtcggtactggtgcaggaactgatggactacatcgggcaaagccactac
ctgccgggcgatgaatcgttgacctgcgatcaaagcgaagcccgggtaaaagcacacatt
acccgtttgcatacccgtatgccctttgatgcacaaaactatctaccgggcgaacagcaa
agctatgcccgggaatggctgcctgcggcgagcctgtcaggaaaagcgcacacggatttt
gtccagacgcttccctttgagatgcctgaagcgctgacgctggaaacgctgcagcgattt
tgggctcatccggtaagggcttttttccagatgcgtctgagggtcaacttccgctctgaa
gaaagtgagatcccggaaacggaaccgttcactcttgaaggattaacccgctatcagctt
aatcagcaattgcttaacacgctggttgaagagaaggatgctgaacaactgtttcgccgt
tttcgtgcggcgggcacgcttccctatgggccatttggcgaaattctgtgggatacgcag
cgtcaggagatgcagtcgctggctgaacgcattatcgcctgtcgtcagccctgccagagt
atggaaatcgatcttaactgtaacggcgtgcaaatcaccggttggctgccacaggtgcaa
gaggacggtttgttgcgctggcgcccatctttgataagcattgcgcagggtgtgcaactt
tggctggaacatcttgtctattgtgccagtggcggtacgggagagagccggttgttcctg
cgtaaagacggggaatggcgttttcctccactggatgcagagcaggcactgctgtacctg
tcgcagctcattgacgggtatcgggaaggcatgtcgtcaccattgctggtattgcccgaa
agcggcggcgcctggataaaaacctgttatgacgccgtaaatgatgccatgttagatgac
gatgcaacgttgcaaaaagcgcgcagtaagtttctgcaggcctatgaaggcaacatgatg
gtacggggtgaaggtgatgatatctggtatcagcgtctttggcgtcaactggatgcggct
acgctggagaccattgttttacagtctcagcgttacctgttaccgatttttcgctttaat
cagtcatga
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