Citrobacter freundii complex sp. CFNIH3: C2U38_21030
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Entry
C2U38_21030 CDS
T06381
Name
(GenBank) adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Pathway
cfq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2U38_21030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfq03400
]
C2U38_21030
Enzymes [BR:
cfq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
C2U38_21030
DNA repair and recombination proteins [BR:
cfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C2U38_21030
Prokaryotic type
C2U38_21030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
DUF6308
YqhI
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AUV29015
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All DBs
Position
4211242..4212294
Genome browser
AA seq
350 aa
AA seq
DB search
MQASQFSAQVLSWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFP
TVTDLAHAPLDEVLHLWTGLGYYARARNLHKAAQQVVTQHGGSFPQTFDEVAALPGVGRS
TAGAILSLSLGQHFPILDGNVKRVLARCYAVSGWPGKKEVEKKLWELSEQVTPAHGVERF
NQAMMDLGAMVCTRSKPKCSLCPLENGCVASANASWALYPGKKPKQTLPERTGYFLLMQH
ENEVLLAQRPPSGLWGGLYCFPQFDDEDGLRDWLAQRQINADNLTQLNAFRHTFSHFHLD
IVPMWLPVSSFTSCMDEGNALWYNLAQPPSVGLAAPVERLLQQLRAGTQV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtctcaattctcggctcaggttttgagctggtacgacaaatacgggcggaaa
acgctgccctggcaaattgacaagacgccttacaaagtatggctctctgaggtgatgctg
caacaaactcaggttgcgaccgttatcccctactttgagcgctttatggcgcgcttccca
acggtaacggatttagcccatgcgccgctggatgaagtcctgcatttatggaccgggctg
ggctattacgctcgagcgcgtaatctgcataaagccgcgcaacaggttgtgacgcagcac
ggcggctcattcccgcaaacctttgatgaagtggccgccctgccaggcgtcggacgttca
actgcaggcgcgatcctttcgctctccctgggtcagcattttccgattcttgacggtaac
gtcaaacgtgtgctggctcgctgttatgctgtaagcggctggccgggtaaaaaagaggtc
gaaaagaaactgtgggagttgagtgagcaggttacgccagcccatggggttgagcggttt
aatcaggcgatgatggatttaggcgccatggtctgtacgcgctcaaaacccaaatgttcc
ctgtgtccgttggaaaatggctgtgtggcgagcgccaatgcaagctgggcgctgtaccca
ggtaaaaaacccaaacagacattaccagaacggacgggctattttttactgatgcagcat
gaaaacgaggtgttgctcgcgcagcgaccacccagcggcttatggggtggcttatactgt
tttccgcagtttgatgatgaggatgggctacgcgactggctggcgcaacggcaaattaac
gcagataatctgacccaacttaatgcgtttcgccatacctttagccatttccacttagat
attgtgcctatgtggcttcccgtgtcctcattcacctcatgcatggatgaaggcaacgcg
ctctggtataacttagcgcaaccgccgtcggtcggactggcggcccccgtggagcgtttg
ttacagcaattacgtgccggcacacaggtttaa
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