Citrobacter freundii complex sp. CFNIH3: C2U38_25365
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Entry
C2U38_25365 CDS
T06381
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Pathway
cfq00071
Fatty acid degradation
cfq00280
Valine, leucine and isoleucine degradation
cfq00310
Lysine degradation
cfq00362
Benzoate degradation
cfq00380
Tryptophan metabolism
cfq00410
beta-Alanine metabolism
cfq00640
Propanoate metabolism
cfq00650
Butanoate metabolism
cfq00907
Pinene, camphor and geraniol degradation
cfq00930
Caprolactam degradation
cfq01100
Metabolic pathways
cfq01110
Biosynthesis of secondary metabolites
cfq01120
Microbial metabolism in diverse environments
cfq01200
Carbon metabolism
cfq01212
Fatty acid metabolism
Module
cfq_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C2U38_25365 (fadB)
00650 Butanoate metabolism
C2U38_25365 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
C2U38_25365 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C2U38_25365 (fadB)
00310 Lysine degradation
C2U38_25365 (fadB)
00380 Tryptophan metabolism
C2U38_25365 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C2U38_25365 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C2U38_25365 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C2U38_25365 (fadB)
00930 Caprolactam degradation
C2U38_25365 (fadB)
Enzymes [BR:
cfq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C2U38_25365 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C2U38_25365 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C2U38_25365 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
C2U38_25365 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AUV28593
LinkDB
All DBs
Position
5042550..5044739
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQPNLKGLLLRSN
KAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGAEQALK
IGLVDGVVKQDKLLDGAIAVLRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQFVK
AKAKKLTKNVEAPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLL
NKQLERGKIDGLKMAGVISTIHPTLDYSGFERVDVVVEAVVENPKVKKAVLAETEDQVRP
DTVLASNTSTIPINELASALKRPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAW
ASQMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMSAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDNKGKP
KKEEDATVDDLLAEVSQPKRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPAGLRDKARHNEPYYPQVEPA
RPVGSLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaaaggcgacaccctgtacctcgactggctggaagatggcatcgccgaactg
gtgttcgatgccccaggttcagtcaataaactcgacacggccaccgttgccagcctgggc
catgcgcttgacgtgctggaaaaacaaccgaatttaaaagggctgctgctgcgttctaac
aaagcagcctttattgttggtgccgacatcaccgaattcctttcactgttcctcgtgcct
gaagagcaactgagccagtggctgcattttgccaacagcgtctttaatcgcctggaagat
ctgcctgttccgactctctcagcagttaacggctatgcgctgggcggcggctgcgagtgt
gtcctggcgaccgattatcgtctggctacgccggacctgcgcatcggcctgccggaaacc
aagctgggcattatgccaggctttggcggctccgtgcgtatgccacgtatgctgggtgcg
gacagcgcgctggaaattattgctgcgggtaaagatgtgggtgctgagcaggcgctaaaa
atcggtctggtcgatggcgtagtgaagcaagacaaactgcttgatggcgcgatcgcggta
ttacgtcaggcgattaacggcgacctcgactggaaagccaaacgtcagccgaagctggag
ccgttgaaactcagtaaaattgaagcggcaatgagctttaccatcgccaaaggtatggtg
gcgcagacggcaggtaagcattatcccgcaccgattaccgcggtaaaaaccattgaagca
gcggcccgttttggccgtgaagaagcgctgaatctggaaaataaaagctttgttccactg
gcgcacaccaatgaagcccgcgcactggttggaattttccttaacgatcagttcgtgaaa
gccaaagccaaaaagctcaccaaaaatgttgaagcgccaaagcaagcggcagtgctgggc
gcaggcattatgggcggcggcatcgcttaccagtcggcctggaaaggcgtgccggttgtc
atgaaagatatcaacgacaaatcattaacgctgggtatgaccgaagcggccaagctactg
aacaaacagctggagcgcggcaaaattgacggtctgaaaatggcgggcgttatttccacc
attcaccccaccctcgactatagcggtttcgaacgcgtggacgtggtagttgaagcggtc
gtagaaaacccaaaagtgaaaaaagcggtactggcggaaaccgaagatcaggttcgcccg
gacaccgtactggcttcgaatacttccaccatcccaatcaacgaactggccagcgcgctt
aagcgtccggaaaacttctgtgggatgcacttctttaacccggtgcaccgtatgccgctg
gttgagatcattcgcggcgagaaaagctcggatgaaaccatcgctaaggttgtcgcctgg
gcaagccagatgggcaaaacgccgattgtggttaatgactgccctggtttcttcgttaac
cgcgtgctgtttccctattttgccggtttcagtcagctgctgcgcgacggggcggatttc
cgcaaagtcgacaaagtgatggaaaaacagtttggttggccgatgggcccggcttatctg
ctggacgtggtaggtattgataccgcgcaccacgcgcaggcggtgatgtccgcaggcttc
cctcagcgtatgcagaaagattatcgcgatgcgatagacgccctgtttgatgctaaccgt
ttcgggcagaaaaacggtctcggattctggcgttataaagaagacaacaagggcaagccg
aagaaagaagaagatgccaccgttgacgatctgctggcagaggtcagccagccgaaacgc
gacttcagcgatgaagagattatcgcccgcatgatgatccctatggtcaacgaagtagtg
cgttgcctggaagaaggcattattgccagcccggcagaagccgatatggcgctggtatac
ggtctgggcttccctccgttccacggcggtgcgttccgctggctggatacgctcggcagc
gcgaagtatctcgatatggctcagcagtatcagcaccttggtccgctgtatgaagttccg
gccggtctgcgtgataaagcgcgccataacgaaccgtattatccccaggttgagccagcc
cgcccggttggcagcctgaaaacggcttaa
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