Citrobacter freundii complex sp. CFNIH3: C2U38_27755
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Entry
C2U38_27755 CDS
T06381
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Pathway
cfq03420
Nucleotide excision repair
cfq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2U38_27755
03430 Mismatch repair
C2U38_27755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfq03400
]
C2U38_27755
Enzymes [BR:
cfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C2U38_27755
DNA repair and recombination proteins [BR:
cfq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2U38_27755
MMR (mismatch excision repair)
Other MMR factors
C2U38_27755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Viral_helicase1
UvrD-helicase
AAA_22
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AUV29231
LinkDB
All DBs
Position
pCFR-9161:121748..122770
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AA seq
340 aa
AA seq
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MDKRVIFAVAGSGKTTLLIRRLSEDRRTLLLTFTVNNEAHLRAQIIRRFGFIPEGIRVMT
WFEFLHGFCFRPFLQEQLASRGLSFDQPPPRIPRTNARHYQDPAGRLYHRRLAHLLTARG
LLPDIRIRLARYYDELLVDEVQDFAGHDFNFLLELCRAEITVLCCGDFYQHTFDTSHDGN
VNSTLHDDITRYEARFDAAGFAVDRDTLNRTWRCSASVCEFITGQLNIRIAAHGIHASLI
ETIADTERSATLHADNTVIKLFYREHHRYGCYSMNWGASKGLDHFQDVCIVMGSSHWKLL
TRQELATLPPSSRNRLYVACSRARGNIYFVPETHLRRFRN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggataagagagtgatatttgcggttgccggctcgggcaagaccacgctgctgatacga
cggttgagtgaggacaggaggacgctgctcctgaccttcaccgtgaataatgaagcgcat
ctgcgggcacagattatcagacgttttggctttatcccggaagggatcagggtgatgacc
tggtttgagtttctgcacggtttttgcttccggcctttcctgcaggagcagctggcatcg
cgtggcctgagcttcgaccagcccccacccagaataccgcgcacgaatgcccggcattat
caggatcccgccggacggctgtatcaccggaggctcgcacatttactgacagcccggggg
ttgctgccggatatccgtatccggcttgcccgttactatgatgaactgcttgtcgatgaa
gtccaggactttgccggacatgactttaattttctgctggagctctgccgcgcggaaatc
actgtgctctgttgcggcgatttttatcagcatacctttgatacaagccatgacggcaac
gttaattcaacgctgcacgacgacatcacgcgatatgaggcccgcttcgacgcagcaggt
ttcgcggttgaccgggacacgctcaaccggacatggcgttgctcagcttcagtgtgcgag
tttatcaccgggcaactgaacatccgtatcgctgcccatgggatacatgcctccctgatt
gaaacgatcgcagatacagagcgctcagccaccctgcacgccgataatacggtgattaag
ctcttctatcgtgaacatcaccgttacggctgctattccatgaactggggcgccagtaaa
gggctcgatcactttcaggatgtctgcattgtgatgggatcctcccactggaagcttctg
acccgtcaggaactggcaacccttccaccgtcgtcccgtaacaggctgtacgtggcatgc
tcacgggcgcgcggcaacatttattttgttcccgaaactcatctgcgccgattccgaaac
tga
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