Citrobacter freundii complex sp. CFNIH3: C2U38_28390
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Entry
C2U38_28390 CDS
T06381
Symbol
lacZ
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
cfq
Citrobacter freundii complex sp. CFNIH3
Pathway
cfq00052
Galactose metabolism
cfq00511
Other glycan degradation
cfq00600
Sphingolipid metabolism
cfq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
C2U38_28390 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
C2U38_28390 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
C2U38_28390 (lacZ)
Enzymes [BR:
cfq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
C2U38_28390 (lacZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
AUV29324
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All DBs
Position
pCFR-9161:complement(230188..233262)
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AA seq
1024 aa
AA seq
DB search
MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQESRSLNGEWR
FAWFPAPEAVPESWLERDLPDADTVIVPSNWQMHGYDAPIYTNVTYPIAVNPPYVPTENP
TGCYSLTFNIDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLHA
GENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDLHVATHFNDDFSRAV
LEADVQIYGELRDELRVTVSLWQGETQVASGTAPFGGEIIDERGGYADHVTLRLNVENPK
LWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEH
HPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHG
MVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVD
PSRPVQYEGGGADTFATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYA
HAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDR
QFCMNGLVFADRTPHPALTEAKYQQQFFQFSLSGQTIEVTSEYLFRHSDNELLHWMVALD
GKPLASGEVPLDVAPQGKQLIELPGLPQPKSAGQLWLTVHVVQPNATTWSAAGHISAWQQ
WRLAENLSVTLPSAPHAIPQLTTSETDFCIELDNKRWQFNRQSGFLSQMWIGDKKQLLTP
LRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTV
HAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASNTPHPARIGLTCQLAQVAERVNWLG
LGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNI
SRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGSYHYQLL
WCQK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgattacggattcactggccgtcgtattacaacgtcgtgactgggaaaaccct
ggcgttacccaacttaatcgccttgcggcacatccccctttcgccagctggcgtaatagc
gaagaggctcgcaccgatcgcccttcccaagagtcgcgcagcctgaatggtgaatggcgc
tttgcctggtttccggcaccagaagcggtaccagaaagctggctggagcgcgatcttcct
gacgccgatactgtcatagtcccctcaaactggcagatgcacggttacgatgcgcctatc
tacaccaacgtgacctatcccattgcggtcaatccgccgtatgttcccacggagaatccg
acgggttgttactcgctcacatttaatattgatgaaagctggctacaggaaggccagacg
cgaattatttttgatggtgttaactcggcgtttcatttgtggtgcaacgggcgctgggtc
ggttacggacaggacagtcgtttgccgtctgaatttgacctgagcgcatttttacacgcc
ggagaaaaccgcctcgcggtgatggtgctgcgctggagtgacggcagttatctggaagat
caggatatgtggcggatgagcggcattttccgtgacgtctcgttgctgcataaaccgacc
acgcaaatcagcgatttacatgtagccactcactttaatgatgatttcagccgcgctgta
ctggaggcagacgttcagatatacggcgagctgcgcgatgagctgcgggtgacggtttct
ttgtggcagggtgaaacgcaggtcgccagcggcaccgcgcctttcggcggtgaaattatc
gatgagcgtggtggttatgccgatcacgtcaccctacgtctgaacgtcgaaaacccgaaa
ctgtggagcgccgaaatcccgaatctctatcgtgcagtggttgaactgcacaccgccgac
ggcacgctgattgaagcagaagcctgcgatgtcggtttccgcgaggtacggattgaaaat
ggtctgctgctgctgaacggcaagccgttgctgattcgcggcgttaaccgtcacgagcat
catcctctgcatggtcaggtcatggatgagcagacgatggtgcaggatatcctgctgatg
aagcagaacaactttaacgccgtgcgctgttcgcattatccgaaccatccgctgtggtac
acgctgtgcgaccgctacggcctgtatgtggtggatgaagccaacattgaaacccacggc
atggtgccaatgaatcgtctgaccgatgatccgcgctggctacccgcgatgagcgaacgc
gtaacgcgaatggtgcagcgcgatcgtaatcacccgagtgtgatcatctggtcgctgggg
aatgaatcaggccacggcgctaatcacgacgcactctatcgctggatcaaatctgtcgat
ccttcccgcccggtacagtatgaaggcggcggagccgacaccttcgcaaccgatattatt
tgcccgatgtacgcgcgcgtggatgaagaccagcccttcccggctgtaccgaaatggtcc
atcaaaaaatggctttcgttgcctggagagacgcgcccgctgatcctttgcgaatacgcc
cacgcgatgggtaacagtcttggcggcttcgctaaatactggcaggcgtttcgtcagtac
ccccgtttacagggcggcttcgtctgggactgggtggatcagtcgctgattaaatatgat
gaaaatggcaatccgtggtcggcttacggcggtgattttggcgatacgccgaatgatcgc
cagttctgcatgaacggtctggtctttgccgaccgcacgccgcatccggcgctgacggaa
gcaaaataccagcagcagtttttccagttcagtttatccgggcaaaccatcgaagtgacc
agcgaatacctgttccgtcatagcgataacgagctcctgcactggatggtggcgctggat
ggcaagccgctggcaagcggtgaagtgcctctggatgtcgctccacaaggtaaacagttg
attgaactgcctggactaccgcagccgaagagcgccggacaactctggctaacggttcac
gtagtgcaaccgaacgcgaccacatggtcagcagccggacacatcagcgcctggcagcag
tggcgtctggcggaaaacctcagcgtgacactcccctccgcgccccacgccatcccgcaa
ctgaccaccagcgaaacggatttttgcatcgagctggataataagcgttggcaatttaac
cgccagtcaggctttctttcacagatgtggattggcgataaaaaacaactgctgacgccg
ctgcgcgatcagttcacccgcgcaccgctggataacgacattggcgtaagtgaagcgacc
cgcattgaccctaacgcctgggtcgaacgctggaaggcggcgggccattaccaggccgaa
gcagcgttgttgcagtgcacggcagatacgcttgccgacgcggtgttgattaccacggtc
cacgcgtggcagcatcaggggaaaaccttatttatcagccggaaaacctaccggattgat
ggaagtggtcaaatggcgattaccgttgatgttgaagtggcgagcaatacgccacatccg
gcgcggattggcctgacctgccagctggcgcaggtagcagagcgggtaaactggctcgga
ttagggccgcaagaaaactatcccgaccgccttactgcggcctgttttgaccgctgggat
ctgccattgtcagacatgtataccccgtacgtcttcccgagcgaaaacggtctgcgctgc
gggacgcgcgaattgaattatggcccacaccagtggcgcggcgacttccagttcaacatc
agccgctacagtcaacagcaactgatggaaaccagccatcgccatctgctgcacgcggaa
gaaggcacatggctgaatatcgacggtttccatatggggattggtggcgacgactcctgg
agcccgtcagtgtcggcggaattccagcttagcgccggtagctaccattaccagttgctc
tggtgtcaaaaataa
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