Camelus ferus (Wild Bactrian camel): 102504259
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Entry
102504259 CDS
T02979
Symbol
COL27A1
Name
(RefSeq) collagen alpha-1(XXVII) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr04820
Cytoskeleton in muscle cells
cfr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102504259 (COL27A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102504259 (COL27A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfr00536
]
102504259 (COL27A1)
Glycosaminoglycan binding proteins [BR:
cfr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102504259 (COL27A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
102504259
NCBI-ProteinID:
XP_032334155
UniProt:
A0A8B8SVZ6
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All DBs
Position
4:57427983..57570372
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AA seq
1847 aa
AA seq
DB search
MGAGSARGARGTAVAAARGGGFLLTWILVSLACHLASTQGSPEDADVLQRLGLSWTKAAG
GRSPPPPGVIPFQSGFIFTQRARLQAPTAAVIPAALGTELALVLSLCSHRVNHAFLFAVR
SRKHKLQLGLQFLPGKTVVHLGPRRSVAFDLDMHDGRWHHLALELRGRTVTLVTACGQHR
VPVPLSFHRDPALDPQGLFLFGKMSPHAVQFEGALCQFSIYPVTQVAHNYCTHLRKQCGQ
ADTYRPQLGPFLPRDSGTPLTFQTDLGLLGLGNLTTATPALGARPASRGSRVTVVPASPL
KPLKTSVTGPHQPVTVGGPARNPLPSAKLSASEGLPSVPAASPTSSTRLVQPLQKSLATK
IPQSHPTKPSVLSPSIAPVKSPRPTQKTAPPFFTKPALPTKNPMQPTFHLVPAKVSHPTV
KPIQRNPITPRPPPPSVWPLPLAAGSSKKLSPTVVQAKMSSRASEPSPAHTSTQRPPHPT
VLPLLPVPSPGSTRTAQPPATAMPPTLAPGSALTGSKKLTGSEAAKKARPKSSPRKPVPL
RPGKAARDVPLNDPTTGSSPRQPRPSRQTTPAPALVPTLERERFLTSSPRPASTGYSFFH
LVGPTPFPLLMGPPGLKGDCGLPGPPGLPGLPGPPGARGPRGPPGPYGNPGLPGPPGAKG
QKGDPGLSPGKAYDGAKGDMGLPGLSGNPGPLGRKGHKGYPGPAGHPGEQGPPGPEGSPG
AKGYPGRQGLPGPVGDPGPKGSRGYIGLPGLFGLPGSDGERGLPGVPGKRGKMGRPGFPG
DFGERGPPGLDGNPGELGLPGPPGVPGLIGDMGVLGPIGYPGPKGMKGLMGNMGEPGLKG
DKGEQGVPGVSGDTGFQGDKGSQGLPGFPGARGKPGPLGKVGDKGSPGFPGPPGPEGFPG
DIGPPGDNGPEGVKGKPGARGLPGPRGHLGPEGDEGPMGPPGVPGLEGQPGRKGFPGRPG
PDGLKGEPGDGGRPGPVGEQGLLGFIGLVGEPGIMGEKGDRGMMGPPGAPGPKGSMGHPG
TPGGVGNPGEPGPPGPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRPG
QPGQQGAAGERGYLGTRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPVGPPGEMGPQGPPG
AVGEPGLPGEAGMKGDLGPLGTPGEQGLIGQRGEPGLEGDNGPAGPDGLKGDRGDPGPDG
ERGEKGQEGLKGEDGPPGPPGITGVRGPEGKPGKQGEKGRTGAKGAKGYQGQLGEMGVPG
DPGSPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYNGHKGIMGPLGPPGPKGEKGEQG
EDGKAEGPPGPPGDLGPVGDRGDRGEPGDPGYPGQEGVQGLRGNPGQQGQPGHPGPRGRP
GPKGSKGEEGPKGKQGKAGAPGRRGIQGLQGLPGPRGVVGRQGLEGVAGPDGLPGRDGQA
GQQGEQGDDGDPGPMGPAGKRGNPGVAGLPGAQGPPGFKGESGLPGQLGPPGKRGTEGGT
GLPGNQGEPGSKGQPGDSGEMGFPGMAGLFGPKGPPGDIGFKGIQGPRGPPGLMGKEGII
GPLGILGPSGHQGPKGDKGSRGDLGLQGPRGPPGPRGQPGPPGPPGSPIHFQQDDLGAAF
QTWMDTSGALRAEGYSHPDRLVLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL
MDCEQKMVDGTYWVDPNLGCSSDTIEVSCNFTHGGQTCLKPITASKVEFAISRVQMNFLH
LLSSEVTQQITIHCLNMTVWQEGTRQTPAKQAVRFRAWNGQIFEAGGQFRPEVSMDGCKV
QDGRWHQTLFTFRTQDPQQLPIVSVDNLPPASSGKQYRLEVGPACFL
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgggatcggcgcggggggcccgaggcacagcggtggcggcggcgcgcgggggg
ggctttctcctcacctggatcttagtctcgcttgcctgtcacctggcctccacccaagga
tctcctgaagatgcggacgtcctgcagcggctgggcctcagctggacgaaggcggcgggc
ggccggagccccccgcctccgggggtcattccgttccagtcgggcttcatctttacccag
cgggcccggctccaggccccaacggccgccgtcatccctgccgccctgggcacagagctg
gcgctggtgctgagcctctgctcccaccgggtgaaccatgccttcctcttcgccgtccgc
agccggaagcacaagctgcagctgggcctgcagttccttcccggcaagacagtcgtccac
ctggggccccggcgctccgtggccttcgacctcgacatgcacgacgggcgctggcaccac
ctggccctggaactccgtggccgcacggtcaccctggtgacggcctgcgggcagcaccgg
gtgcccgtcccgctgtctttccacagggacccagcgctcgacccccagggcttgttcctt
tttgggaagatgagcccacacgcagtccagtttgaaggtgccctgtgccagttcagtatc
taccctgtgacgcaggtcgctcacaattactgtacccacctgcgaaagcagtgtggacag
gctgacacgtaccggccccagctgggacccttcctcccccgagactctggcacgcccctc
accttccagaccgacctgggcctgctaggcctagggaacctgaccactgccacgccagcc
ctgggggcacggccagcaagcagggggtccagggtgactgtggtgcctgcctctcccctc
aagcccctaaagactagcgtcacaggccctcaccagcccgtcacagtgggaggcccagcc
cggaaccccctgccatctgccaagctgtcagccagtgaagggcttccttccgtgcctgca
gcctctcccaccagctccaccagacttgtccagccattgcagaagagcctagccaccaaa
atcccccaaagtcacccaaccaagccttcagtcctttctccttcaattgcccctgtcaaa
agcccacgccccacccagaagacagctccgcctttcttcacaaagccagccctacccacc
aagaacccgatgcaacccactttccacctagttcccgccaaagtctcccatcccacagtg
aagccaatccagaggaaccccataacgcccaggccccctccgcccagtgtctggccgcta
cctcttgctgctggctcctctaaaaagctctctcccacagtggtccaggccaagatgagc
agtcgtgccagtgagccatcccctgcccacaccagcacacaaagacctccccatcccact
gtcttgcccctattacctgtccccagtcctggctctaccaggactgctcagccaccagcc
actgctatgcctcccaccctcgctcctggttcagccctcactggaagcaaaaaactcact
ggatcagaagccgcaaagaaagccagacccaagagcagcccccggaagcccgtccctctc
agacctgggaaggcagcaagagatgtcccactgaacgatccgacaactgggtccagcccc
agacagccccggcccagccggcagaccaccccggccccagcgttggtcccgacgttggag
cgagagcgattcctgacctccagcccccggcctgcgagcactggctattcattcttccac
ctggtgggacccacacctttcccgctgctgatgggacctccaggactcaagggagactgt
ggtttgccgggtccccctgggttgcctgggctccctggaccccctggtgcacggggtcct
cggggtcctcctgggccttatggaaatccaggcctccctggtccacctggggccaaagga
cagaaaggggacccggggctctcaccaggcaaggcctacgatggggcaaagggcgacatg
ggcttgcctgggctttcggggaatccaggacctcttggacgaaagggacacaagggctat
cctggaccggcagggcaccccggagaacaggggccaccgggacccgagggcagcccaggg
gccaaaggttaccctggcaggcaggggttacctggaccggtaggagaccctggccccaaa
ggcagccgaggctacattggactcccaggactcttcggcctgccagggtccgatggagag
cgaggtctgcctggcgttcctggcaagaggggcaagatgggtaggccggggtttcctgga
gactttggggaaagaggccctccgggactggatggaaaccccggagaactgggcctacca
gggcccccaggagtccccggcctcattggcgacatgggagtattgggtccgatcggctac
ccaggacccaagggcatgaagggactgatgggaaacatgggggaacccggactgaaaggt
gataagggtgaacaaggggttccaggtgtgtcaggagataccggattccaaggagacaag
gggagccagggattgccagggttcccgggtgcacgggggaagccagggcctctgggcaaa
gttggagacaaaggatcccctgggtttcctgggccgcctggacctgagggtttccccgga
gacattggcccccctggggacaacggcccagaaggcgtgaagggtaagcctggagctcga
ggcctgccgggaccccgtgggcacctggggcccgagggagatgagggacccatggggcca
ccaggggttcctggcttggagggtcaacccggcagaaaggggtttcctggaaggcctggc
ccagatggcttaaagggtgagccaggcgatggtggacggccggggcccgtgggcgagcag
ggacttctgggattcattggtctggtcggggagccaggaatcatgggagaaaagggtgac
cggggcatgatgggacccccaggcgcgcccggacccaaggggtcgatgggtcatcctgga
actccaggtggtgttgggaaccccggagagcctggacctccgggtcctccaggatctcga
ggtccaccgggcatgaggggagcaaagggacgccggggaccccgaggaccagacggacca
gctggggagcaggggtccaggggcctgaagggccctccgggaccacagggcagaccgggg
cagccggggcagcagggcgcggctggcgagcgagggtacttgggcacgcgaggctttcct
ggcatcccaggtccctctggccccccaggcaccaagggcctcccaggagaaccgggccct
cagggaccccaggggccagttggccctccgggagagatggggccccaggggccaccaggt
gcagtgggagaaccgggccttcctggggaagctgggatgaagggtgatcttgggcctctg
ggcacccctggggagcagggcctcattgggcagcggggagagccaggccttgaaggtgac
aatgggcctgcagggcccgacgggctgaagggggacaggggtgaccctgggcctgacggt
gaacgtggcgagaagggccaggagggactgaagggtgaggacgggccccccggtccccct
ggcatcactggcgtccggggtcctgaaggaaaaccagggaagcaaggcgagaagggccgg
acaggagccaagggtgccaagggctaccaaggacagctgggtgagatgggcgtccctgga
gaccccggatcccctggcaccccaggccctaaagggtcccggggcagcctgggaccaacg
ggtgctccaggacggatgggggcccaaggagaaccgggactagctggttacaatggacac
aaaggcatcatgggacccctcggacctcctggaccaaagggcgaaaagggagagcagggc
gaggatggcaaggccgagggaccccccgggccacctggagatctgggccctgtgggtgat
cgaggagaccgcggggaaccaggggatcctggataccctggacaggagggtgtacaaggc
ctccgtggaaatccaggccagcagggtcaacccgggcatccgggaccccgggggcggccg
ggccccaaaggatcgaaaggggaagagggaccaaagggaaagcaaggcaaggctggggca
ccaggacggagggggatccagggcctgcaggggctgccggggcctcggggcgtggtgggg
agacagggcctagagggtgtcgctggaccagatggacttcctggcagggacggtcaagca
ggacagcagggggagcagggagacgatggggaccctggccccatgggccctgctgggaag
agaggaaatcccggtgtggctggcttgcctggagcacaggggcccccaggattcaagggt
gaaagtgggttacctgggcagctgggtccccctggcaagcgaggaacagaaggaggaaca
ggccttcccgggaaccagggggagcctggatccaaaggccagccgggtgactctggtgag
atgggtttcccaggaatggctggcctcttcggacccaagggacccccaggagacatcggc
ttcaaaggcatccaaggccctcgggggcctcctggcctgatgggaaaggaaggcatcatt
gggcccctaggaatcctgggaccttcaggacaccagggtccaaagggtgacaaaggcagc
cgaggggacttgggattgcaaggtccgaggggtcctcctggtcccagagggcagcccggc
ccaccgggtcctccagggagccctatccactttcaacaagatgaccttggggcagctttc
cagacgtggatggacactagtggagcactgagagcagagggttacagccatccggaccgg
ctggtgctggaccagggaggggagatctttaaaaccttacactacctcagcaacctcatc
cagagcattaagacgcccctgggcaccaaagagaaccccgcccgggtctgccgggacctc
atggactgtgagcagaagatggtggatggtacctactgggtggatccaaaccttggctgc
tcatccgacaccatcgaagtctcctgcaacttcacacatggtggacagacgtgtcttaag
cccatcacagcctccaaggtggaatttgccatcagccgggtccagatgaattttctgcac
ctgctaagctctgaggtgacacagcagatcaccatccactgccttaacatgaccgtgtgg
caggagggcaccaggcagaccccagccaaacaggctgtgcgcttccgggcctggaacggg
cagatctttgaagccgggggtcagttcaggccagaagtgtcaatggatggctgcaaggtc
caggatggccgctggcatcagacgcttttcaccttccggacccaggacccccagcagctg
cccattgtcagcgtggacaacctccctcctgcctcatcagggaagcagtaccgcctcgaa
gttggacctgcgtgcttcctctga
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integrated database retrieval system
