Camelus ferus (Wild Bactrian camel): 102505489
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Entry
102505489 CDS
T02979
Symbol
COL5A1
Name
(RefSeq) collagen alpha-1(V) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr04820
Cytoskeleton in muscle cells
cfr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102505489 (COL5A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102505489 (COL5A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfr00536
]
102505489 (COL5A1)
Glycosaminoglycan binding proteins [BR:
cfr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102505489 (COL5A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
102505489
NCBI-ProteinID:
XP_032334781
UniProt:
A0A8B8SXJ7
LinkDB
All DBs
Position
4:74098287..74241659
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AA seq
1849 aa
AA seq
DB search
MDVHTRWKARSALRPGAPLLSPPVLLLLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGI
TKTTGFCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAF
LVSIYNEQGIQQIGLELGRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSIHKK
NVTLILDCKKKTTKFLDRSDHPMIDVNGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYD
HCTHYSPDCDTAVPDKPQSQDPNPDEYYPDGEGEGDTYYYEYPYYEDTDDVGKEPTPTEV
PVGATRETTEVAEELTQPPTEAAPVPDTSEGPGREEDPGIGDYDYVPSEDYYTPPPYEDL
NYGEGMETPDENPDQLPDLGARAEVPTSTVLTSNASNPDPPPEEGGDDLEGEFTEETIRN
LDENYYDPYYDPTISPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLLEGPP
GPEGPAGLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFSGGGD
AGSKGPMVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPMGPPGSGGLKGEPGDMGPQ
GPRGVQGPPGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPS
GPPGLPGDDGERGDDGEAGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNV
GPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPP
GEKGSQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEI
GPPGPRGEDGPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFP
GANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPN
GPQGPTGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPM
GERGHPGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGAL
GLKGSEGPPGPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPA
GRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQP
GPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPP
GPPGPRGPSGSPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEK
GESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEP
GQTGSPGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAP
GKPGPDGLRGIPGPVGEQGLPGAPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLI
GPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPWLAGGPPGPKGAKGSSGP
TGPKGEAGHPGPPGPPGPPGEVIQPLPIQASRTRRHIDASQLMDDGEGVESYMDYADGME
EVFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKV
YCNFTGGGATCIFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMT
FLRLLSASAHQNITYHCYQSVAWQDAATGSYDKAMRLLGSNDEEMSYDNSPYIRALVDGC
ATKKGYQKTVLEIDTPRVGQVPVVDVMFNDFGDASQKFGFEVGPACFLG
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccacacccgctggaaagcgcgcagcgcgctccgcccgggcgccccgctgctg
tccccgccggtgctgctgctgctgctgctgctgctgctgtgggcgccgcctccgagccgc
gcagctcagccagcagatctcctgaaggttctagactttcacaacctgcctgacggcata
accaagactacaggcttttgtgcaacgcggcgatcttccaaaggcccggacgtggcttac
agagtcacgaaggacgcccagctcagcgcacccaccaagcagctgtaccctgcatctgca
tttcctgaagatttctccattctaaccactgtgaaagccaagaaaggcagccaggccttc
ctggtctccatctacaacgagcaaggcatccagcagatcggcctggagctgggccgctct
ccggtcttcctctacgaggaccacacagggaagccggggccagaggactaccccctcttc
agaggcatcaatctgtcagatggcaagtggcacagaatcgctctcagcatccacaagaag
aatgtcacgttgatcctggactgtaaaaagaagaccaccaaattcctagaccgtagcgac
caccccatgattgacgtcaacggcatcatcgtgttcggcacgcggattctggacgaggaa
gtgtttgagggagatatccagcagctgctcttcgtctcggaccaccgggcggcttacgat
cactgcacgcactacagccctgactgtgacaccgcggtccccgacaagccccagtcccag
gaccccaacccggatgaatactacccagatggagagggggaaggagacacctactactat
gagtacccctactacgaggacacggacgacgtgggcaaggagcccacccccaccgaggtg
ccagtaggagctactcgcgagaccacggaggtggccgaggagctgacccagccccccacg
gaagccgctccagtgcccgacaccagcgaggggcccgggagggaggaggaccctggcatc
ggggactatgactacgtgcccagcgaggactactacacgccccccccttacgaggacctc
aactacggagaaggcatggagaccccggatgagaaccctgaccagctccccgacctgggc
gcccgggccgaagttcccaccagcacggtcctcacctccaacgcctccaacccggacccg
cctccggaggaagggggcgacgacctggagggggagttcacggaggagaccatcaggaac
ctggacgagaactactacgacccctactacgaccccaccatctccccgtcggagatcggg
cccggcatgcccgcgaaccaggacaccatctacgagggcatcggagggccacgtggcgag
aaaggtcaaaagggagaacccgccatcatcgaaccaggcatgctcctggaggggccgccc
ggcccggaaggccccgccggtctcccaggacctccaggaacgatggggcccactggccaa
gtgggggacccgggagaacggggtccccctggacgcccaggccttcctggggctgatggg
ctgcccggccctcctggaaccatgctcatgctgcctttccggttctcagggggcggcgat
gccggttccaaaggacccatggtctcagcccaggaatcccaagctcaagccatcctccag
caggcccggctggcgttgaggggaccagctggcccgatgggtctcaccgggagacctggc
cccatgggccctcccgggagcggaggtctgaagggcgagccgggagacatggggcctcag
ggtccccgaggtgtgcagggtccacccggcccggcaggaaagcctggaagaaggggccga
gccggcagcgacggagcaagagggatgcccgggcagactggccccaagggtgaccgtggc
ttcgacggcctggctggactgcccggggagaagggccaccggggtgaccccggtccttct
ggcccgccgggacttccaggagacgacggagaaaggggtgacgacggcgaagccgggccc
cgagggctgcctggggagcccgggccgcgtggtctgctggggccgaaggggccccccggc
cctcctggacctcctggtgtgacaggaatggacggccagccaggcccgaaaggcaacgtg
ggtccccagggggagcccgggcccccaggacagcagggtaatccgggtgcccagggtctt
ccaggcccccagggtgcaatcggtcctcccggagaaaagggtcccctgggtaagccaggt
ctcccaggaatgcccggtgctgacggacccccggggcaccccggcaaagaaggccctcca
ggagagaagggaagccagggtcctcccggcccccaaggcccgatcggctaccctggtccc
cgcggagtcaagggggcagatggcatccgaggtctgaagggcaccaagggtgagaagggt
gaagacggctttcctggcttcaaaggagacatgggcatcaagggtgaccggggggagatt
ggcccacctggtcccagaggggaagacggccccgaaggccccaagggccgtggaggtccg
aacggtgacccgggccctctggggccccccggggagaagggaaaactcggcgtcccaggg
ttaccgggttacccaggaagacaagggccgaagggttccatcggctttcctggatttcct
ggcgctaacggagagaagggcggcaggggcacacctgggaagccgggaccacggggacag
cgaggcccaacgggcccacgaggggaaagaggcccccgcggcatcaccgggaagcctggc
cccaagggcaactctggaggtgacggcccggccggccctccgggcgaacggggacccaac
ggaccccaaggacccacagggttccctggaccgaagggccccccgggccccccgggcaag
gatgggctcccaggacaccctggacagaggggcgagacgggtttccaaggcaagaccggc
cctccaggccccccaggagtggtcggccctcagggtcccacgggagagactggtccgatg
ggtgagcgcggccaccccgggccgccgggcccccccggtgaacaggggctcccgggcctc
gccggaaaagaggggacgaagggtgatccaggccccgccggccttcctgggaaagacgga
cccccagggttacgtggcttccctggggaccgagggcttcctggcccagtgggggcgctg
ggactgaaaggcagcgagggcccccctggcccgccaggccctgcgggatctccgggggag
agaggtccagcgggtgctgctgggcccatcggaattccagggagacctgggccccagggg
cctccagggccagctggggagaaaggagctcctggtgagaaaggcccacaaggcccggcc
ggccgagacggtctgcagggtcccgtggggctccccggcccggccggccccgtgggcccc
cctggagaagatggagacaagggagagatcggggagccgggacagaagggaagcaagggg
gacaaaggcgaacagggtccccctgggcctacgggacctcaaggccccatcggacagcca
ggcccctccggagctgacggcgagccaggtcctcgtggccagcagggcctttttgggcag
aaaggtgacgaaggtccgagaggttttcctgggccccccggacccgtggggctgcagggc
ctgccgggacccccaggagagaaaggcgagacgggagatgtgggccagatgggcccgcca
ggtccccccggcccccggggaccctccggatctccaggtgctgacgggccacaaggcccc
cccggtgggataggcaaccccggagccgtgggagagaagggtgaacctggcgaggctgga
gaacctggccttcctggagaagggggccccccgggacccaagggtgaaagaggagagaag
ggcgagtcgggcccttctggtgctgctgggccccccggacccaagggccctcccggagac
gacggtcccaaaggcagccccggcccggttggttttcctggagatcccggtccccccgga
gagcctggccctgcgggtcaagacggtcccccgggtgacaaaggagacgacggggaaccc
gggcaaacgggatccccgggccccactggtgagccaggcccgtctgggccgccaggaaaa
aggggcccccccggccccgcgggccccgaaggcaggcagggagagaaaggagccaaggga
gaagctggcttggaaggtcctcctgggaagactggccccattggtccccagggggccccc
gggaagcccgggcctgatggtctgcgtgggatccccgggcctgtgggtgaacaaggcctc
cccggagccccaggccccgacggcccccccggccccatgggacccccaggactccccggc
ctcaaaggagattctggacccaaaggcgagaagggtcatccaggcctgatcggactgatt
ggacctccgggcgagcagggagaaaagggtgaccgcgggctccccggccctcagggctcc
tctggcccgaagggagaacagggcatcactggtccctccggccccatcggccccccaggg
cccccctggcttgccggtggccctcctggtccaaaaggtgctaagggctcctcgggtcca
actggcccaaagggtgaggcaggccacccaggaccccccggcccgccgggccccccaggc
gaggtcatccagcccctgccgatccaggcgtccaggacccggcggcacatcgacgccagc
cagctgatggacgacggggagggcgtggagagctacatggactacgcggacggcatggag
gaggtgttcggctcgctcaactccctgaagctggagatcgagcagatgaagcggcccctg
ggcacgcagcaaaaccccgcgcgcacctgcaaggacctgcagctctgtcaccccgacttc
ccagacggggagtactgggtggaccccaaccaaggctgctcccgggattctttcaaagtc
tactgcaacttcacaggcgggggcgccacgtgtatcttccccgacaagaagtccgagggg
gccagaatcacttcttggcccaaagaaaacccaggttcctggttcagtgaattcaagcgt
ggcaaactgctctcctacgtggacgccgagggcaaccccgtgggcgtggtccagatgact
ttcctgcggctgctaagtgcctctgctcaccagaacatcacctaccactgctaccagtcg
gtggcctggcaggacgccgccacgggcagctacgacaaggccatgcgcctcctgggctcc
aacgacgaggagatgtcctacgacaacagcccctacatccgcgccctggtggacggctgc
gctacaaagaaaggctatcagaagaccgtcctggagatcgacacccccagggtggggcaa
gtgcccgtcgtggatgtcatgttcaatgacttcggtgacgcgtcccagaaatttggattc
gaagtggggccggcttgcttcctgggctag
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