KEGG   Camelus ferus (Wild Bactrian camel): 102507112
Entry
102507112         CDS       T02979                                 
Symbol
SF3B1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
cfr  Camelus ferus (Wild Bactrian camel)
Pathway
cfr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102507112 (SF3B1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfr03041]
    102507112 (SF3B1)
   03036 Chromosome and associated proteins [BR:cfr03036]
    102507112 (SF3B1)
Spliceosome [BR:cfr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102507112 (SF3B1)
 Complex B
    102507112 (SF3B1)
 Complex C
   U2 SnRNP specific factors
    102507112 (SF3B1)
Chromosome and associated proteins [BR:cfr03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    102507112 (SF3B1)
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Adaptin_N UNC45-central DUF2298 TALPID3
Other DBs
NCBI-GeneID: 102507112
NCBI-ProteinID: XP_006175278
UniProt: A0A8B6Y6V9
LinkDB
Position
5:73524609..73570659
AA seq 1365 aa
MCCFPTRGPPRGCSVTCYPTVRALPPGACAENSPQLFFSVAAATSGSSWERQFRLCVRVD
KMAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIA
ATELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEY
KKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAG
ELKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRA
KGSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKT
ERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTP
IGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPA
GYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLL
VDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLL
MSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISN
LAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ
ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPY
GIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQS
PDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVE
LANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYA
FQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTA
VVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPR
LTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVN
TFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVP
ELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGV
YGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPAR
KVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq 4098 nt   +upstreamnt  +downstreamnt
atgtgctgcttcccgacgcgaggacctccacgtggctgctctgtcacgtgttacccgact
gtgcgcgcgctcccgcccggtgcatgcgcagagaacagcccgcagctatttttctccgtg
gccgcggcgacgagcggaagttcttgggagcgccagttccgtctgtgtgttcgggtggac
aaaatggcgaagatcgccaagactcacgaagacattgaagcacagattcgagaaattcaa
ggcaagaaggcagctcttgacgaagctcaaggagtgggccttgattctacaggttattat
gaccaggaaatttatggtggaagtgacagcagatttgctggatacgtgacatcgattgct
gcgactgaacttgaagatgatgacgacgactactcatcatctacaagtctgctcgggcaa
aagaagccaggataccacgcccctgtggcactgcttaatgacataccacagtcaacagaa
cagtatgatccatttgctgagcaccgacctccgaagattgcagaccgggaagatgaatac
aaaaaacataggcggaccatgataatttccccggagcgtcttgatccttttgcagatgga
gggaagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacag
catttaactaaagaagagagagaaattaggcaacagctagcagaaaaagctaaagctgga
gaactaaaagtcgtcaatggagcagcagcatcccagcctccttcaaaacgaaaacggcgt
tgggatcaaacagctgatcagactcctggtgccactccaaaaaagctatcaagttgggat
caagcagagacccctggacataccccttccttaagatgggatgagacaccaggtcgtgca
aagggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagt
cacacacctgcgggggctgctactcctggacgaggtgatacaccagggcacgcaacacca
ggccacggaggtgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaaca
gaaagagatacccctgggcatggaagtggatgggctgagactcctcgaacagatcgaggt
ggagattccattggtgaaacaccaactcctggagccagtaaaagaaagtcacgttgggat
gaaacaccagctagtcagatgggtggaagcactcctgttctgacccctggaaaaacacca
attggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgact
cctgaacaacttcaggcttggcggtgggagagagaaattgatgagagaaatcgcccactg
tctgacgaagaattagatgctatgttcccagaaggatataaggtacttcctcctccagct
ggttatgttcctattcgaactccagctcgaaaactgacagcaactccaacacctttgggt
ggtatgaccggtttccacatgcaaactgaagatagaactatgaaaagtgttaatgaccag
ccatcgggaaatcttccatttttaaaacctgatgatattcagtactttgataaacttttg
gttgatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaag
ttgcttttaaagattaagaatggaacacctccaatgagaaaggctgcgttgcgtcagatt
actgataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctctactg
atgtctcctacacttgaggatcaagaacgtcatttacttgtgaaagttattgatagaata
ttatacaaacttgatgacttagttcgaccatatgtgcacaagatcttagtggtcattgaa
ccattgttgattgatgaagattactatgccagggtggaaggtcgagagattatttctaat
ttggcaaaggctgctggtctggctactatgatctctaccatgagacctgatatagataac
atggatgagtatgtccgtaacacaacagctagagcttttgctgttgtcgcctctgccctg
gggattccttcattattgcccttcttaaaagctgtgtgcaaaagcaagaagtcctggcaa
gcgagacacactggtattaagattgtacagcaaatagctattcttatgggctgtgccatc
ttgccacatctcagaagtttagttgaaatcattgagcatggtctcgtggatgagcagcag
aaagttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccctat
ggtattgaatcttttgattctgtgttaaagcctctatggaagggtatccgccaacacaga
ggaaagggtctggctgctttcttaaaagctattggatatcttattcctctcatggatgca
gaatatgccaactactatactagagaagtgatgttaattcttattcgagaattccagtct
cctgatgaagaaatgaagaaaattgtgctgaaggttgtaaagcagtgttgtggaacagat
ggtgtagaagcaaactacattaaaacagagatccttcctccttttttcaaacacttctgg
caacatagaatggctttggatagaagaaattaccgacagttagttgatactactgtggag
ttggcaaacaaagtaggtgcagcagaaattatctccaggattgtggatgatctgaaagat
gaagctgagcagtacagaaaaatggtgatggaaacaattgagaaaattatgggcaacttg
ggagcagcagatattgatcataaacttgaagaacaactgattgatggtattctttatgct
ttccaagaacagactacagaggactcagtaatgttgaacggctttggcacagtggtcaat
gctcttggcaaacgagtcaaaccttatttgcctcagatctgtggtacagttttgtggcgt
ttaaataataagtcagcaaaagttcggcaacaggcagctgacttgatctctcgaactgct
gttgttatgaagacttgtcaagaggaaaaactgatggggcacttgggtgttgttttgtat
gagtatttgggtgaagagtaccctgaagtcttgggcagcattcttggagcactgaaggcc
attgtaaatgtaataggtatgcataagatgaccccaccaattaaagatctgctgcctaga
ctcacccccatcttaaagaataggcatgaaaaagtacaagagaattgtattgatcttgtt
ggacgtattgctgataggggagctgaatatgtgtctgcaagagaatggatgaggatttgt
tttgagcttttagagctcttaaaagctcacaagaaagctattcgtagagccacagtcaac
acatttggttatattgcaaaggccattggccctcatgatgtattggctacacttttaaac
aacctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgtc
gctgaaacgtgttcacccttcacagtactgcctgccttaatgaatgaatacagagttcct
gaactgaatgttcaaaatggagtgttaaagtcactttccttcttgtttgaatatattggc
gaaatgggaaaggactacatttatgctgtaacaccactacttgaagatgctttaatggat
agggaccttgtacacagacagacggctagtgcggtggtgcagcacatgtcacttggggtt
tatggattcggttgtgaagattcgctgaatcacttgttgaactatgtatggcccaatgtg
tttgagacatctccccatgtaattcaggcagttatgggggccctggagggtctgagagtt
gctattggaccatgcagaatgcttcagtattgtttacagggtttgtttcatccagcccgg
aaagtcagagatgtatattggaaaatttacaattccatctacattggttcacaggatgct
ctcatagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaa
cttgattatatcttataa

DBGET integrated database retrieval system