Camelus ferus (Wild Bactrian camel): 102507112
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Entry
102507112 CDS
T02979
Symbol
SF3B1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102507112 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfr03041
]
102507112 (SF3B1)
03036 Chromosome and associated proteins [BR:
cfr03036
]
102507112 (SF3B1)
Spliceosome [BR:
cfr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
102507112 (SF3B1)
Complex B
102507112 (SF3B1)
Complex C
U2 SnRNP specific factors
102507112 (SF3B1)
Chromosome and associated proteins [BR:
cfr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102507112 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
102507112
NCBI-ProteinID:
XP_006175278
UniProt:
A0A8B6Y6V9
LinkDB
All DBs
Position
5:73524609..73570659
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AA seq
1365 aa
AA seq
DB search
MCCFPTRGPPRGCSVTCYPTVRALPPGACAENSPQLFFSVAAATSGSSWERQFRLCVRVD
KMAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIA
ATELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEY
KKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAG
ELKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRA
KGSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKT
ERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTP
IGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPA
GYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLL
VDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLL
MSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISN
LAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQ
ARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPY
GIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQS
PDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVE
LANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYA
FQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTA
VVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPR
LTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVN
TFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVP
ELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGV
YGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPAR
KVRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgcttcccgacgcgaggacctccacgtggctgctctgtcacgtgttacccgact
gtgcgcgcgctcccgcccggtgcatgcgcagagaacagcccgcagctatttttctccgtg
gccgcggcgacgagcggaagttcttgggagcgccagttccgtctgtgtgttcgggtggac
aaaatggcgaagatcgccaagactcacgaagacattgaagcacagattcgagaaattcaa
ggcaagaaggcagctcttgacgaagctcaaggagtgggccttgattctacaggttattat
gaccaggaaatttatggtggaagtgacagcagatttgctggatacgtgacatcgattgct
gcgactgaacttgaagatgatgacgacgactactcatcatctacaagtctgctcgggcaa
aagaagccaggataccacgcccctgtggcactgcttaatgacataccacagtcaacagaa
cagtatgatccatttgctgagcaccgacctccgaagattgcagaccgggaagatgaatac
aaaaaacataggcggaccatgataatttccccggagcgtcttgatccttttgcagatgga
gggaagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacag
catttaactaaagaagagagagaaattaggcaacagctagcagaaaaagctaaagctgga
gaactaaaagtcgtcaatggagcagcagcatcccagcctccttcaaaacgaaaacggcgt
tgggatcaaacagctgatcagactcctggtgccactccaaaaaagctatcaagttgggat
caagcagagacccctggacataccccttccttaagatgggatgagacaccaggtcgtgca
aagggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagt
cacacacctgcgggggctgctactcctggacgaggtgatacaccagggcacgcaacacca
ggccacggaggtgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaaca
gaaagagatacccctgggcatggaagtggatgggctgagactcctcgaacagatcgaggt
ggagattccattggtgaaacaccaactcctggagccagtaaaagaaagtcacgttgggat
gaaacaccagctagtcagatgggtggaagcactcctgttctgacccctggaaaaacacca
attggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgact
cctgaacaacttcaggcttggcggtgggagagagaaattgatgagagaaatcgcccactg
tctgacgaagaattagatgctatgttcccagaaggatataaggtacttcctcctccagct
ggttatgttcctattcgaactccagctcgaaaactgacagcaactccaacacctttgggt
ggtatgaccggtttccacatgcaaactgaagatagaactatgaaaagtgttaatgaccag
ccatcgggaaatcttccatttttaaaacctgatgatattcagtactttgataaacttttg
gttgatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaag
ttgcttttaaagattaagaatggaacacctccaatgagaaaggctgcgttgcgtcagatt
actgataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctctactg
atgtctcctacacttgaggatcaagaacgtcatttacttgtgaaagttattgatagaata
ttatacaaacttgatgacttagttcgaccatatgtgcacaagatcttagtggtcattgaa
ccattgttgattgatgaagattactatgccagggtggaaggtcgagagattatttctaat
ttggcaaaggctgctggtctggctactatgatctctaccatgagacctgatatagataac
atggatgagtatgtccgtaacacaacagctagagcttttgctgttgtcgcctctgccctg
gggattccttcattattgcccttcttaaaagctgtgtgcaaaagcaagaagtcctggcaa
gcgagacacactggtattaagattgtacagcaaatagctattcttatgggctgtgccatc
ttgccacatctcagaagtttagttgaaatcattgagcatggtctcgtggatgagcagcag
aaagttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccctat
ggtattgaatcttttgattctgtgttaaagcctctatggaagggtatccgccaacacaga
ggaaagggtctggctgctttcttaaaagctattggatatcttattcctctcatggatgca
gaatatgccaactactatactagagaagtgatgttaattcttattcgagaattccagtct
cctgatgaagaaatgaagaaaattgtgctgaaggttgtaaagcagtgttgtggaacagat
ggtgtagaagcaaactacattaaaacagagatccttcctccttttttcaaacacttctgg
caacatagaatggctttggatagaagaaattaccgacagttagttgatactactgtggag
ttggcaaacaaagtaggtgcagcagaaattatctccaggattgtggatgatctgaaagat
gaagctgagcagtacagaaaaatggtgatggaaacaattgagaaaattatgggcaacttg
ggagcagcagatattgatcataaacttgaagaacaactgattgatggtattctttatgct
ttccaagaacagactacagaggactcagtaatgttgaacggctttggcacagtggtcaat
gctcttggcaaacgagtcaaaccttatttgcctcagatctgtggtacagttttgtggcgt
ttaaataataagtcagcaaaagttcggcaacaggcagctgacttgatctctcgaactgct
gttgttatgaagacttgtcaagaggaaaaactgatggggcacttgggtgttgttttgtat
gagtatttgggtgaagagtaccctgaagtcttgggcagcattcttggagcactgaaggcc
attgtaaatgtaataggtatgcataagatgaccccaccaattaaagatctgctgcctaga
ctcacccccatcttaaagaataggcatgaaaaagtacaagagaattgtattgatcttgtt
ggacgtattgctgataggggagctgaatatgtgtctgcaagagaatggatgaggatttgt
tttgagcttttagagctcttaaaagctcacaagaaagctattcgtagagccacagtcaac
acatttggttatattgcaaaggccattggccctcatgatgtattggctacacttttaaac
aacctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgtc
gctgaaacgtgttcacccttcacagtactgcctgccttaatgaatgaatacagagttcct
gaactgaatgttcaaaatggagtgttaaagtcactttccttcttgtttgaatatattggc
gaaatgggaaaggactacatttatgctgtaacaccactacttgaagatgctttaatggat
agggaccttgtacacagacagacggctagtgcggtggtgcagcacatgtcacttggggtt
tatggattcggttgtgaagattcgctgaatcacttgttgaactatgtatggcccaatgtg
tttgagacatctccccatgtaattcaggcagttatgggggccctggagggtctgagagtt
gctattggaccatgcagaatgcttcagtattgtttacagggtttgtttcatccagcccgg
aaagtcagagatgtatattggaaaatttacaattccatctacattggttcacaggatgct
ctcatagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaa
cttgattatatcttataa
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