Camelus ferus (Wild Bactrian camel): 102508827
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Entry
102508827 CDS
T02979
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102508827 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfr03019
]
102508827 (XAB2)
03041 Spliceosome [BR:
cfr03041
]
102508827 (XAB2)
Messenger RNA biogenesis [BR:
cfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102508827 (XAB2)
Spliceosome [BR:
cfr03041
]
Complex B
Other components
Prp19-related factors
102508827 (XAB2)
Complex C
102508827 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_NPHP3
TPR_1
Motif
Other DBs
NCBI-GeneID:
102508827
NCBI-ProteinID:
XP_032322140
UniProt:
A0A8B8RXH6
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All DBs
Position
22:22319654..22329351
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AA seq
855 aa
AA seq
DB search
MVVMARQSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISRNPDKVQSLSV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRSIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPSRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgacagtcaaggcccgagcggccggaccttgtcttcgaggaagag
gaccttccctatgaggaggaaatcatgcggaaccagttctccgtcaaatgctggctccgc
tacatcgagttcaaacagggtgccccgaagcccaggctcaatcagctgtatgaacgggca
ctaaagctgctgccctgcagctacaaactctggtaccgatacctgaaggcacgccgggca
caggtgaagcatcgctgtgtgactgaccccgcctatgaagatgtcaacaactgccatgag
agggcatttgtattcatgcacaagatgccacggctgtggctagattattgccaattcctg
atggaccagggacgcatcacgcacacccgccgcacttttgaccgtgcgctccgggcattg
cccatcacacagcactctcgtatttggcccctttacctgcgcttcctgcgctcacaccct
ctgccggagactgctgtgcggggctaccgacgcttcctcaagctgagccccgagagcgcc
gaggagtacattgaatacctcaagtcgagtgaccggctggacgaggcggcacagcgcctg
gccactgtggtcaatgatgagcgcttcgtgtccaaggccggcaagtccaactaccagctg
tggcacgagctctgcgacctcatctcccggaatccagacaaggtgcagtcactcagcgtg
gacgccattatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgc
tcgctggccgactactatatccgcagcggtcactttgagaaggctcgggatgtgtatgag
gaagccatccggacggtgatgaccgtgcgggacttcacccaggtgtttgacagctatgcc
cagtttgaggagagcatgatcgcggcgaagatggagactgcctcggagctggggcgggag
gaggaggatgacgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccgg
cggcccctgctcctcaacagcgtcctgctacgtcagaacccacaccacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacggag
gccgtgcagacggtggaccccttcaaggccacaggcaagccccacacgctgtgggtcgcg
tttgccaagttttatgaggacaacgggcagctggatgacgcccgcatcatcctggagaaa
gccaccaaggtgagcttcaagcaggtggacgacctagccagcgtgtggtgcgagtgtggc
gaactggagctccggcacgagaactacgaccaggccctgcggctgctgcggaaggcaacg
gcgctgcctgcccgccgcgccgagtacttcgacggctcggagcccgtgcagaaccgcgtg
tacaagtctctgaaggtgtggtcgatgctggccgacctggaggagagcctcggcaccttc
cagtccaccaaggccgtgtatgaccgcatcctggacctgcgcatcgccacgccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtactttgaggagagcttcaaggcg
tatgagcgtggcatttcgctgttcaagtggcccaacgtgtctgacatctggagcacctac
ctgaccaaattcattgcccgctacgggggccgaaagctggagcgggcacgggacctcttt
gaacaggcactggacggctgccctcccaaatacgcaaagacactgtacctgctgtacgcg
cagctggaggaggagtggggcctggcccggcacgccatggctgtgtacgagcgcgccacc
agggccgtggagcctgcccagcagtacgacatgttcaacatctacatcaagcgggcggcc
gagatctacggagtcacccacacccgcagcatctatcagaaggccattgaggtgctgtcg
gatgagcatgcccgggagatgtgcctgcggttcgctgacatggagtgcaagctcggggag
atcgaccgtgcccgggccatctacagcttctgctcgcagatctgtgacccccggacgaca
ggggcgttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
cgggagatgctgcgcatccgccgcagcgtgcaggccacttacaacacgcaggtcaacttc
atggcctcccagatgctcaaggtgtcgggcagcgccacgggcaccgtgtccgacctcgcc
cccgggcagagtggcatggatgacatgaagctgctggagcagcgggccgaacagctggca
gccgaggccgagcgtgaccagccctcgcgggcccagagcaagatcctgtttgtgaggagc
gacgcctcccgggaggagctggccgagctggcgcagcaggctaacccggaggagatagag
ctgggtgaggacgaggacgaggacgagatggacctggagcccaacgaggtgcggctggag
cagcagagcgtaccagccgccgtgttcgggagcctgaaggaagactga
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