Camelus ferus (Wild Bactrian camel): 102511845
Help
Entry
102511845 CDS
T02979
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X2
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr04612
Antigen processing and presentation
cfr05145
Toxoplasmosis
cfr05152
Tuberculosis
cfr05164
Influenza A
cfr05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
102511845 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102511845 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
102511845 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
102511845 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
102511845 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cfr01001
]
102511845 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cfr04054
]
102511845 (CIITA)
Enzymes [BR:
cfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102511845 (CIITA)
Protein kinases [BR:
cfr01001
]
Serine/threonine kinases: Other
TAF1 family
102511845 (CIITA)
Pattern recognition receptors [BR:
cfr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102511845 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
102511845
NCBI-ProteinID:
XP_014420071
UniProt:
A0A8B7KG95
LinkDB
All DBs
Position
18:complement(29236612..29282836)
Genome browser
AA seq
1210 aa
AA seq
DB search
MNHFQTILTQVRMLLSSHRPSQVQALLDNLLAEELLSREYHYALLQEPDGEALARKISLT
LMEKGDPELALLGWVWSGLPTSAAEKDPGYKDLGGSGQCATMELGPIEGGYLELLNSNAD
PLQLYHLCDRMDVAGEEETELYSEPDTDTINCEQFSRLLCAMEGDEETKEAYANIAELDQ
YVFQDSQLEGLSKDIFIEHIGLEEMIGESVEVLEEAGQKSQKRPFPEELPADLKHRKLAE
PLTMPMVTDTFLVGPVSDSLAQPCPAPPALFNKESASSQTRLEDTVLMPGPPSSSLLSCF
SLPAGSIQIIPTVSTLPQGLWQISGAGAGLSSIVIYRGEMPQASQTPTSSGPPVHNFPKS
PDRPGSTSPFAPSAADLPSMPEPALTSRANLTEDETSPTQSPAALKPSSKLPRWPESVEQ
FCRSLRDKYQAKPAGPEGILVEVDLVRVRLERSSSKGQERELATLDWAERQPARGGLAEV
LLATSDRRRPRETQVIAVLGKAGQGKSHWAQAVSWAWACGQLPQYDFVFCIPCHCLDHRG
DTYRLQDLLFSPGLQPRPVEDEVFSYILRRPDRILLILDAFEELETQDGFLHSACGPGSA
EPRSLRGLLAGLFQRKVLRGCTLLLTARPRGRLAQSLSKADAMFEVAGFSAQQAETYVMR
YFETSGATEHQKRALALLQAQPFLLSHSHSPTVCRAVCQLSEALLELGDEAELPSTLTGL
YVGLLGPAAHDSPPGALVGLARLAWDLGRRHHSSLREDQFLSAEVRAWAVARGLVQPTRG
GPETELVFSSFLLQCFLGALWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVG
LVFQPRPRCLGALVGLAAATSADRKQKVLTRYLKRLQPGTLQVGRLLELLHCAHEALDAG
LWQHVLHGLPARLSFLGTRLSPPDTYVLGSALEAAGRNFSLDLRSTGIDPTGLGTLVGLS
CVTHFRATLSDTVGLWESLQQRGEAKLLRAVEEKFTIEPFKATSMKDVEDLGNLVQIQRT
RSSSEDTAGELPAVRDLKKLEFALGSALGPQAFSKLVRILEAFSSLQHLDLDSLSENKIG
DEGVAQLSATFPQLKALETLNLSQNNITDVGACKLAKALPSLAASLVRLSLYNNYICDAG
AESLAHVLPDMVSLRVLDVQYNKFTAAGAQQLTASLRKCPQVETLAMWTPTIPFGVQEHL
QQLDSRIILR
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccagaccatcctgactcaggtccggatgctgctctccagtcatcggccg
agtcaggtgcaggcactcctggacaacctgctggcagaggagcttctctccagggagtac
cactatgccctgctccaggagccagatggtgaggctctggcccggaagatctccttgacc
ctgatggagaaaggagacccagagctggccctcttgggatgggtctggagtgggctgccg
acctcagcagctgagaaggaccctggctacaaggaccttggtggcagtggacagtgtgcc
accatggagttgggacctatagaaggcgggtacctggagcttctcaacagcaatgccgac
cctttgcaactctaccacctctgtgaccggatggatgtggctggagaagaagagacagag
ctctactcagaacccgatacggacaccatcaactgcgaacagttcagcaggctgttgtgt
gccatggaaggtgatgaagagaccaaggaggcttatgccaatatcgcggaactggaccag
tacgtcttccaggattcccagctggagggcctgagcaaagacattttcatcgagcacata
ggactggaagaaatgatcggtgagagtgtggaggtgctggaggaagcaggacagaaaagt
cagaaaagacccttcccagaggagctgcctgcggatctgaagcacaggaagctagccgag
cccctcaccatgcccatggtgactgacactttcctggtggggccagtgagtgactccttg
gctcagccctgcccggcaccacctgctctgttcaacaaggaatcagcatccagccagacc
cggctggaggacactgtcctgatgcccgggcccccttccagttcattgttgagctgcttc
agcctccctgctggatccatccagatcatccccactgtttccactctgccccaagggctc
tggcagatctcaggggccggggcagggctttccagtatagtcatctaccgaggtgagatg
ccccaggccagccaaacacctacttcaagtggcccacctgtccacaacttcccgaagtcc
ccagaccgacctggctctaccagccccttcgccccatctgcagctgaccttcctagcatg
cccgaaccagccctgacctcccgtgcaaacctgacagaggatgaaacatcccccacccaa
agtccggcagctctcaagccctccagcaagcttcccagatggcctgagagcgtggagcag
ttctgccgctcactacgggacaagtaccaggctaagcctgcaggcccggaaggcatcctg
gtggaggtggacctggtgagggtacggctggagaggagcagcagcaagggtcaggagaga
gagctggccaccctggactgggcagagcggcagccggcccgagggggtctggccgaggtg
ctgctggccactagtgaccgccggcggccacgagagacgcaggtgatcgccgtgctgggc
aaagcaggacaggggaagagtcactgggctcaggccgtgagctgggcttgggcttgcggc
cagctgccacagtatgactttgtcttctgcatcccctgccactgtttggaccatcgaggg
gacacttaccgcctgcaggatctgctcttctccccgggcctgcagccccggccggtggag
gatgaagtattcagttacatcttgcggaggcctgaccgcattctgctcatcctggatgcc
ttcgaggagctcgaaacccaagacggcttcttgcacagtgcgtgcgggcccgggtcagca
gaaccccgctccctccgggggctgctggcaggcctcttccagcgcaaggtgctacgaggc
tgcaccctgctgctcacggcccggccccgaggacgcctggcccagagcctgagcaaggct
gacgccatgttcgaggtagccggcttctcggcccagcaggccgagacctacgtgatgcgc
tactttgagacttcgggggccactgagcaccaaaagagagccctggccctcctccaggcc
cagccgtttctcctgagtcacagccacagccccactgtgtgccgggccgtgtgtcagctc
tctgaggccctcctggagctgggcgatgaggccgagctgccctccacactcaccggcctg
tatgttggcctactaggcccagccgcccacgacagtcccccgggggccctggtgggactg
gccagactggcctgggacctgggccgccgtcaccacagcagcctgcgggaggaccagttc
ctgtcagcagaggtgagggcctgggctgtggccagaggcttggtgcagcccacccggggg
ggcccagagactgagctggtcttctccagcttcctcctgcagtgcttcctgggggccttg
tggctggctctgagcagcgaaatcaaggacaaggagctaccacagtatctggccttgacc
ccaaggaagaagaggccctatgacaactggctggagggcgtgccgcgctttctggtcggg
ctggtcttccagcctcgccctcgctgcctgggagccctggtagggctggcagcggccacc
tcggcggacaggaagcagaaggtgctcaccaggtacctgaagcggctgcagccgggaacg
ctgcaggtggggcggctgctggagctgctgcactgcgcccacgaggcgctggacgctggg
ctttggcagcacgtgctgcacgggctcccggcccgcctctccttcctgggcacccggctc
tcgcctcccgacacctacgtgctgggcagcgccttggaggcggcaggcagaaacttctcc
ctggacctccgcagcaccggcattgaccccacgggactggggaccctcgtgggactcagc
tgtgtcacccatttcagggccaccttgagtgacacggtggggctatgggagtccctgcag
cagcgtggggaagccaagctactccgggcagtggaggagaagttcaccatcgagcctttc
aaggccacgtccatgaaggatgtggaagacctgggcaacctcgtgcagatccagaggaca
agaagttcctctgaagacacagctggggaactccctgctgtccgggacctaaagaagctg
gagtttgcgctgggttctgccttgggcccccaggctttctccaaactggtgaggatcctt
gaggccttttcctcccttcagcatctggacctagactccctgagtgagaacaagatcgga
gacgagggggtcgcccagctctcagccaccttccctcagctgaaggccctggagacactc
aacttgtctcagaacaacatcaccgacgtgggcgcctgcaagctggccaaggccctgccc
tcactggctgcgtccctcgtcaggctgagcttgtacaataactacatctgcgacgcggga
gccgagagcctggcgcatgtgcttccggacatggtgtccctccgggtgctggatgtccag
tacaacaagttcacagccgccggggcccagcagctcaccgccagcctgagaaagtgccct
caagtggagacgctggcgatgtggacacccaccatcccgtttggagtccaggaacacctg
cagcagctggactcacggatcatcctgagatga
DBGET
integrated database retrieval system
