Camelus ferus (Wild Bactrian camel): 102512741
Help
Entry
102512741 CDS
T02979
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr03440
Homologous recombination
cfr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102512741 (PALB2)
03460 Fanconi anemia pathway
102512741 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfr03400
]
102512741 (PALB2)
DNA repair and recombination proteins [BR:
cfr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
102512741 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
102512741 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
102512741
NCBI-ProteinID:
XP_006193177
UniProt:
A0A8B6YMS5
LinkDB
All DBs
Position
18:30908072..30930268
Genome browser
AA seq
1178 aa
AA seq
DB search
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKVKNSVKRTVEEHDSFIQ
QEVSTQLNHSEPKNEVSPCDSLQSNTNVDEETGEKTSITLDFEAESCSPGRGPVEGLCIQ
RSDDTQERFPCRIDGPDGKKSQSKLLGRRKTQERTFISLERESFFDTDSLLLSRKRLKEQ
EEINRENPRTPVAEVRTYLSSPKSDIPDSPAPVSETNVGSVLILPNAKLQKDADTLLSGD
NFPRVAALPLHIPSDSGSGRHLEDKPPKSNCELTTHGLKNISLASNLEAQNKKMIVFTDN
PEVNKTVSASGQLPRSPDSEADNSYSVNELTYDNLLANENQNLKEQDHTEMSFKSPNNVL
DGRNQSLLENEVLGQSKRLSLEVISSVSTENQTQSCTMLEGLLFPAEYYVRTTRRMSTCQ
RKVALEAVIHSHLGVRKKGFKNKQSAKKLNLANEETNQCEIKMSNTYTEQPSSRSPQKLL
SLTKVSCPTGPTKTVTQTSGRKRRGKRKSVCTPVLDHHELPLPTSFTSGVNRSQEEVALH
KDQNEKAIFLEKRVKGKEGHCQKEDSLFYNNYAYLSLDDVAFSAPFLKNDMLSLKHLSPF
LKTIDFQLPDEDFGPLKLEKLKSGSEKPIEPFGSKICGEGHLKERCCIAVEELAPKPTNI
EKEDLEEELIFLPGKVHPKMPVKSQPQEKGLSSSILLFTPLNTVESDDNDRATVDVCSPA
FPILGTTPAFGSPARCEKMSAEVVGRTCSAPQLSHLKATVSLSSDHKQCSSWTSPPELDS
SLHVARRKGWPSCDQDSGPQATPLPTPSLTYKENQPSENSCQETWKHSIEQIEIADVPAC
DNLNPGTLQLVSKLKDPSGSCSVDVSAMWWDTAGFKEPRIVTACEYVVSLWKPLDAWQWE
KIYSWHFAEVPVLQIILMPDVCNLVCVALGNLEIREIRALLCSSDGKSGKQVLLSSGNIK
TVLGLTKRRLVSSSGTLCDQQVEIMTFAEDGGSKEKQFLMPPEETILTFAEVQGMQEALL
GTTVMNNMVIWNLRTGQLLKKIHVGDSYQASVCHRAYSEMGLLFVVLSHPCAKESELLGS
PVFQLIVINPKTTLSVGVMLYCLPQGQAGRFLEGDVKDHFAAAVLTSGTIAIWDLLLGHC
TALLPPVSDQNWSFVKWSGTDSHLLAGQKDGNIFVYRY
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctcccgggaagcccctcagctgtgaggagaaagaaaagttgaaggaaaaa
ttagcattcttgaaaagagaatacagcaagaccctggcccgccttcagcgtgctcaaaga
gctgagaaggttaagaattctgttaagagaacagtggaagaacacgattccttcatccag
caggaagtttcaacacagctaaaccactcagaacctaaaaatgaagtatctccctgtgac
tcattacaaagcaacactaatgttgatgaagaaactggagaaaagacatctatcacactt
gactttgaggctgagtcctgcagccctggacgtggcccagtggaaggattatgcatacaa
agatcagatgatacccaagaacgtttcccctgcaggattgatggccccgatggtaagaaa
agtcagagtaagctgcttggtagaagaaagacacaggagagaacatttatttcactggag
agagaatctttctttgacactgattcgctcttactctctagaaaaagactaaaggagcag
gaagaaatcaatagagaaaaccccaggacacctgtcgctgaagtaagaacttacctttca
agtcctaagtctgacattcctgattctccagcaccagtttcagaaactaatgtagggagt
gtattaattttgccaaatgccaaactgcagaaagatgctgatacactcttaagtggagat
aatttccccagggtggctgcacttcctttgcatattccatcagacagcggtagtggtcgg
caccttgaagataagcctcctaaaagtaactgtgaacttactactcacggtttaaaaaac
attagccttgcttcaaacttagaggcacaaaacaaaaaaatgattgtgtttacagataac
ccagaggtaaacaaaactgtaagtgcaagtggtcagctgcctagaagtcctgactcagag
gcagataactcatattctgtaaatgaactcacgtacgataacttattggcgaatgaaaac
caaaacttaaaagaacaagatcacacagagatgtcttttaaatctcctaataatgttctt
gatggtagaaatcaaagtcttctggaaaatgaagttctaggtcaatcaaagcgtcttagc
ctagaagtaatttcttctgtttctactgaaaatcaaacacagtcttgcacgatgcttgaa
ggccttctctttccagcagaatattatgtcagaacaacacgacgcatgtccacctgccag
aggaaagtagcactggaggctgtaattcacagtcatttgggtgtcagaaaaaaaggtttt
aaaaataagcaatctgctaaaaagttaaacctcgccaatgaagaaactaaccaatgtgaa
attaagatgtccaacacatacacagaacagccaagttcaagaagtcctcagaaacttctc
tcattaactaaagtcagctgtcccactggccccactaagacggttacccagacatctggt
agaaaacgcagaggaaaaagaaagtcagtctgcacccctgtgttagatcatcatgagcta
cctttgccaacttctttcacatcaggtgttaataggtcccaggaagaagtcgccttgcac
aaagatcagaatgaaaaagcaatttttcttgagaagagagttaaagggaaggaaggtcac
tgtcaaaaagaggactcgcttttttacaataattatgcttatttatctttggatgatgtt
gctttcagtgctccatttcttaagaatgacatgctcagtttaaagcacctgtcgcctttt
ctcaaaaccatagactttcaattacctgatgaagactttggacctcttaagcttgaaaaa
ctgaagtccggctccgaaaagccgattgagccttttggatcgaaaatatgtggagagggg
catcttaaagagagatgttgtattgctgtggaggaactggctcctaaaccaaccaatata
gaaaaggaagacttggaagaggaactgatttttctaccaggaaaagtacatcctaaaatg
ccagtaaaaagccagcctcaggagaagggcctttcttcatccattttacttttcactcct
ttaaatactgttgaatctgatgataatgacagagcaacggtagatgtgtgttcacctgct
ttccccatcttgggcactactccagcttttggctccccagcccgatgtgaaaagatgtct
gcagaggtggttggacgcacttgctcagcaccccagctctctcacttaaaagccacagtc
agcctctctagcgatcataagcaatgcagcagttggaccagcccaccagaattagacagc
agcctgcatgtggccagaaggaaaggatggccttcctgcgaccaggattctggtccccaa
gcaacacctctacccactccgtcactcacctacaaagaaaatcagccaagtgaaaattcg
tgtcaggaaacttggaaacattccatcgagcagattgaaatagcagacgtccctgcttgt
gataacttaaacccaggcactctacaattggtttcaaagttaaaggatccttcaggttcc
tgctctgtggacgtgagtgccatgtggtgggacacagctggtttcaaagagccacgtatc
gtaaccgcctgtgaatatgtagtttctctttggaaacctctggatgcttggcagtgggaa
aaaatttattcctggcactttgcagaggttccagtattgcagataattctaatgcctgat
gtttgtaatcttgtgtgtgtggctttgggaaatttggaaatcagagaaatcagggcatta
ctttgttcctcagatggtaaaagtggaaagcaagtactcctgagctctggaaatataaaa
actgtgcttggcctgacaaaaaggaggctagtcagtagcagtgggaccctttgtgatcag
caagtagaaatcatgacgtttgcagaagatggaggaagcaaagaaaaacagtttttgatg
ccccctgaagagactatactgacttttgctgaggttcaagggatgcaggaagctctgctg
ggtaccactgtaatgaacaacatggttatttggaatttaagaactggccagctcctaaag
aagatacacgttggtgactcctaccaagcttcagtctgtcacagagcctattctgaaatg
gggctcctgtttgttgttctgagtcatccttgtgccaaagagagcgagctgttgggcagc
cccgtgtttcagctgattgtgattaacccaaagacgaccctgagtgtgggcgtgatgctc
tactgtcttcctcaagggcaggctggaaggttcctggaaggtgacgtgaaagatcatttt
gccgcagcagtactgacttctggaacaattgccatttgggacttacttctgggtcattgc
actgctctccttccccctgtctctgaccaaaattggtcctttgttaaatggtcaggtaca
gattctcatttgctggctggacaaaaagatggaaatatatttgtgtaccgctactaa
DBGET
integrated database retrieval system
