Camelus ferus (Wild Bactrian camel): 102513183
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Entry
102513183 CDS
T02979
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102513183 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfr03021
]
102513183 (PCF11)
03019 Messenger RNA biogenesis [BR:
cfr03019
]
102513183 (PCF11)
Transcription machinery [BR:
cfr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102513183 (PCF11)
Messenger RNA biogenesis [BR:
cfr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102513183 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
102513183
NCBI-ProteinID:
XP_032344646
UniProt:
A0A8B8TQV2
LinkDB
All DBs
Position
10:38883117..38971852
Genome browser
AA seq
1685 aa
AA seq
DB search
MSEQTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEESSTPGTVV
SSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQVPVQPEKSRPGPSLQIQDLKGTNRDPRLN
RMSQHSSHGKDQSHRKEFLMNTLNQSDTKTSKTVPSEKLNSSKQEKNKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKLSHTKDLKNQESESTRVSDISKRDPRLKKHLQDKTDSKDDDI
KEKRKTTEKKDKDEHMKSSEHRLVGSRNKIINGIVQKQDTITEDSEKQGTKPARSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTPKAGKIRQSGVKQSHMEEFTPPSR
EERNTKRSTKQDVRDPRRIKKTEEDRPQETANQHSTKSGTEPKENVENWQSSKSTKRWKS
GWEENKSLQQGDEHSKAPHLRHRESWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPTEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRTYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDSDKPFVDSPASRFAGLDTNQRLTALAEDRPLYDGPSRPSVARDGPAKMI
FEGPNKLSPRIDGPPTPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGMR
FDGPHGQPVGGLRFDSPRGQPVGGLRFEGGHGPSGAALRFDGPHGQPSGGIRFEGPLLQQ
GVGMRFEGPHGQSVAGMRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFDG
PSVPGGGLRIEGPLGQGGPRFEGCHALRFDGQPGQPSLLPRFDGLHGQPGPRFERTGQPG
PQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQ
TGPYNDPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQNFSNPLNRASGHYFD
EKNLQSSQFGNFGNLPAPITVGNIQASQQVLTGVAQPVAFGQGQQFLPVHPQNPGAFVQN
PSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVAAQPPAEEEEDQN
EDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNR
TEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQ
SVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDC
TPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEERIDTPPACTEESIATPTEIKIEND
TVESV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcagacgccggccgaggccggtactgcgggggcccgggaggacgcctgtcgg
gattatcagtcatcactcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaatgttggaagagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgaaatattccctttgaagaaactttatgccttggatgtcagagtcaattcg
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaagagtcttcaacacctggcacagtggtc
agttcccctagcatctccactcctccaattgttccggatatacaaaagaatctaacccaa
gagcaactaataaggcagcagttactggcaaaacaaaagcagttgttagaacttcagcag
aagaagctggagcttgagctagagcaagctaaggcacaactggcagtttctcttagtgtt
cagcaggagacatccaacttaggtcctggatctgcaccgtccaaattacatgtttcacaa
attccccctatggcagttaaagctccccatcaagttcctgtgcaacccgagaaaagtcgt
ccaggtccatccttacaaattcaggatttgaagggaactaaccgggatccccgtcttaat
aggatgagtcagcattcttctcatggaaaagatcagagtcacaggaaagaattcctaatg
aacacactgaaccagtctgatactaagacaagtaaaactgtaccctctgaaaaattaaat
tcatccaaacaagaaaaaaataaatcaggtgaaaaaataaccaagaaagaactcgaccaa
ttagattctaaatccaaatctaaatctaaatcaccatcacctttgaaaaacaaattatcc
cacacaaaagacttaaaaaatcaagaatctgaaagcacaagggtgtctgatataagcaag
agagatccaagattgaaaaaacatcttcaggataagactgatagcaaagatgatgatata
aaagagaagagaaaaactacagaaaaaaaggataaagatgagcacatgaaatcatctgaa
catagactggtaggaagtagaaataaaatcataaatggcattgtacagaaacaggataca
ataacggaagattcggaaaaacaggggacaaaaccagcaagatcaagtactagaaagcga
tcaagatcacgatcacccaagtcccgctcaccgattatacattctcccaagagaagagat
aggcggtcacccaaacgaaggcaaaggagtatgtctccaacctcaacacccaaagctggg
aagattcgccagtcgggagttaagcagtcacatatggaagagtttactccaccttccagg
gaagaaagaaatacgaagagaagtactaaacaagatgttcgagatccaaggcgaataaaa
aagactgaagaggaccgaccgcaagaaactgcaaatcagcattctacaaaatcaggcact
gaaccaaaggagaatgtagaaaattggcaaagttccaagtctaccaaacgatggaagtct
ggttgggaagagaataaaagtttacaacagggtgatgaacatagtaaagctcctcatcta
aggcatagggagagctggtcaagcactaaaggaatcttgtcacctcgagccccaaagcag
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgggatagtcctacagaagaaaataaaggtggattaaaaaagaaacct
cttttgtctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgtacttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtacgagaagagcagagatcaccgttcaatgat
cgttttccacttaagcgacctagatatgaagattcagataaaccatttgtagatagccca
gcatcaagatttgccggccttgatacaaatcaacgacttacggctttagctgaagacaga
ccattatatgatggacctagtaggccatcagtagcaagagatggcccagccaagatgatt
tttgaaggacctaataaattaagccctagaattgatggacctcctacaccaggttctctt
cggtttgatgggtcaccaggacaaatggggggaggtggccctttgagatttgaaggacca
caaggccagctaggaggtggttgtcctttgagatttgaaggtcctccaggaccagtaggg
acacctctgcggtttgaggggccaattggtcaagcaggaggaggttttcggtttgaaggt
tctcccggtctgaggtttgaggggtctgcaggtggtttgcgatttgaaggaccagggggc
cagcctgtgggtggtctcaggtttgagggacatcggggtcaacctgtgggtggtatgagg
tttgacggacctcatggtcagcccgtgggtgggcttagatttgatagtccccgaggtcag
cctgtaggtgggcttagatttgagggaggtcatggtccgtcaggggctgcacttaggttt
gatggacctcatggtcagccatctggtgggatcagatttgagggccctttgctacagcag
ggagttggaatgaggtttgagggcccccatggtcagtcagtagctggtatgaggtttgaa
ggccaacataatcagcttggtggcaaccttaggtttgagggtccacatggtcaaccaggg
gttgggatcaggtttgaaggacctttagtccaacaaggaggtggaatgaggtttgacggt
ccttctgtaccaggaggtggcctgagaattgaaggacctctgggtcaaggtggtccaaga
tttgaaggttgtcatgctttaaggtttgatgggcagccaggtcagccatcgctgttgcca
agatttgatggattacatggtcagccaggtcctagatttgaaagaactggtcagccaggc
ccacagagatttgatggaccacctggacagcaggttcaaccaagatttgatggtgtacct
cagagatttgatgggccacaacaccagcaagcatcaaggttcgatattcctcttggtctt
caaggcacacgatttgacaatcatccttcacaaaggcttgaatcagtatctttcaatcag
actggtccatataatgatccacctggcaatgcttttaatgccccatcccaaggactacag
ttccaaagacatgaacaaatatttgattcacctcaaggaccaaattttaatggaccacat
ggccctggaaaccagaatttctcgaatccccttaacagagcttctggacactattttgat
gagaagaatcttcagagttctcaatttggaaactttggcaatttacctgctccaataaca
gtaggaaatattcaggcatctcaacaggttctgactggtgttgctcagccagtagcattt
ggccagggacaacaatttttaccagttcatccacaaaatcctggagcatttgttcagaat
ccttcaggagcccttcctaaggcatatcctgataatcatctcagtcaggtggatgtaaat
gaattattttcaaaactgctgaaaacaggaattctcaaattgtcccagcctgattcagct
acaacacaagtaaatgaagttgctgctcagccccctgctgaggaggaggaagatcaaaat
gaagatcaggatgttccagatcttaccaattttacaatcgaagaattgaaacaacgttat
gatagtgttataaatcgactgtacactggtattcagtgttactcttgtggaatgaggttt
acaacatcacagacagatgtatatgcagatcacttggactggcattatcggcaaaataga
actgaaaaagatgttagcagaaaagtcactcacagacgttggtactacagtttaacagac
tggatagaatttgaggaaatagctgacttggaagaacgtgcaaagagccaattttttgaa
aaggtgcatgaagaagttgtgctcaaaactcaggaggctgctaaagaaaaggagttccaa
agtgtacctgctggaccagctggggcagttgagagttgtgaaatttgtcaagaacaattt
gaacagtactgggatgaagaggaggaggaatggcatttaaaaaatgctattagagtagat
ggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgattgt
acaccgtctcccagcaagacaccagttgaaaatcctttgaacattatgttgaacattgtc
aaaaatgaattgcaggaaccttgtgaaagtcccaaagttaaggaagaacgaattgatact
ccaccagcttgtacagaggaaagcatagcaacacccactgaaattaaaatagaaaatgat
acagttgagtcagtttaa
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integrated database retrieval system
