Camelus ferus (Wild Bactrian camel): 102513553
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Entry
102513553 CDS
T02979
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr03015
mRNA surveillance pathway
cfr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102513553 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
102513553 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfr03019
]
102513553 (PABPC1L)
03041 Spliceosome [BR:
cfr03041
]
102513553 (PABPC1L)
Messenger RNA biogenesis [BR:
cfr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102513553 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
102513553 (PABPC1L)
Spliceosome [BR:
cfr03041
]
Complex C
Other components
Complex C specific factors
102513553 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RBD_DEAH11
RRM_5
RRM_7
RRM_occluded
SET_assoc
RRM_3
Motif
Other DBs
NCBI-GeneID:
102513553
NCBI-ProteinID:
XP_014422189
UniProt:
A0A8B8RJ20
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Position
19:2063846..2084405
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AA seq
617 aa
AA seq
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MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDDHGSRGFGFVHFETYEAAQHAISTMNGMLLNDRKVFVGHFKSRRERE
AELGTRVMEFTNVYVKNLHVDVDERRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEK
HEEAQKAVMDMNGREVSGQLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKN
LDDSINDEKLRKEFSPYGVITSAKVMTEGDHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYIQRLSTLRALGGPLLGSFQQPANYFLPAVPQPPAQAPY
YGSGPPVQPAPRWMAQPLRPSSTYPPAASVVRPAAVSRRPSAHVGGARQVSTHVPRPVPH
TQGVANIGTQTTGPSAAGCSTPRGPLLAHRYSWAAHNTPRVQEPAVCIPGQEPLTASVLA
AAPLHEQKQMIGERLYPLIYNIHAPLAGKITGMLLEIDNSELLLMLESPESLNAKVEEAL
TVLQAHQAPEQTRVNVH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggccccggctacccgctcgcctcgctctacgtgggcgacctgcacccc
gatgtgaccgaggccatgctctacgagaagttctcacccgccggccccatcctgtccatc
cgcgtgtgccgcgacgtggccacccgccgctcgctgggctatgcctacatcaacttccag
cagccggccgacgctgagcgggcactggacacaatgaactttgaggtgatcaaaggccag
cccatccgcatcatgtggtcccagcgagacccaggacttcgcaagtcgggtgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaggccttgtatgacaccttctcc
accttcgggaacatcctctcttgcaaggtggtatgtgacgatcatggctcccgaggcttt
ggctttgtccattttgagacctatgaggctgcgcaacacgccatcagcaccatgaacggg
atgctgctgaatgaccgcaaagtctttgttggccacttcaagtcccgacgggagcgagag
gcagagctgggaactcgggttatggagttcaccaatgtctatgtgaagaacctccacgtg
gacgtggatgagcggcgcctgcaggacctcttctcccagtttgggaagatgctgagtgtg
aaggtgatgagggatgacagtggccactcccgcggcttcggctttgtcaactttgagaag
catgaggaagcccagaaggctgtgatggacatgaacgggagggaggtgagtgggcagctg
ctctacgtgggccgggcccagaagcgggtggagcggcagaatgagctgaagcgcaggttc
gaacagatgaagcaggatcggctgacccgttaccagggcgtgaacctgtatgtgaagaac
ctggatgactccatcaatgatgagaaactgaggaaggagttctctccctatggggtcata
accagcgccaaggtgatgacagagggtgaccacagcaaagggtttggctttgtgtgtttt
tcctctccagaagaggcgacaaaggccgtgacagagatgaacgggcgcatcgtgggcact
aagccactgtatgtggcactagcccagcgcaaggaggagcggaaggccatcctgaccaac
cagtacatacagcgcctctccaccttgcgggccctgggcggccccctcctgggctccttc
cagcagcctgccaactacttcctgcccgcggtgccccagcccccagcccaggctccatac
tacggctctggcccaccagtccagcctgcccccaggtggatggcccagccactcagaccc
tcatccacctacccaccagctgcctcagtggtccggccagcagctgtgtctcggcgaccc
tcagcccatgtcggcggtgccaggcaggtctccacccacgtgcctcgcccggtgccccac
acccagggagtggccaacattggtacccagaccacaggacccagtgcagcgggatgctct
actccaagagggcctctcctggcacacagatattcctgggcagcacacaacacccccagg
gtccaggagcccgctgtgtgtatccccgggcaggagcccttgactgcatccgtgctggct
gcagccccgctgcacgagcagaagcagatgattggtgagcgtctctacccgcttatctac
aatatccacgccccgctggctggcaagatcacgggcatgctgctggagattgacaactcg
gagctgctgctcatgctggagtccccggagtcccttaatgccaaggtcgaagaggctttg
acagtgttgcaggcacaccaggccccggagcagacccgagtgaacgtgcactga
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