Camelus ferus (Wild Bactrian camel): 102514469
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Entry
102514469 CDS
T02979
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102514469 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfr03041
]
102514469 (DHX38)
Enzymes [BR:
cfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102514469 (DHX38)
Spliceosome [BR:
cfr03041
]
Complex C
Other components
Step II factors
102514469 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
102514469
NCBI-ProteinID:
XP_014413858
UniProt:
A0A8B7K976
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All DBs
Position
9:complement(47579246..47596291)
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AA seq
1227 aa
AA seq
DB search
MEDSSEDASIHRLEGTDVDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSRISSYKDWEESRDDQRDAEEEGSDQAGRSSRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDRKKERSRDRDYDRKRDRDERDRSRHSS
RSERDGGSERSSRRSEPESPRHRPKDAATPSRSTWEEEDSGYGSSRRSQWESPSPTPSYR
DSERNHRVSSRDRDRSVRSRYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREDG
EEGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGR
IVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMG
VKKEEEPDKALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQE
LLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEE
MGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLN
TDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQ
EDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYS
QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL
QIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS
LGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI
VSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKN
NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQ
AAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEW
LAELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVR
STKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagcagtgaggatgcctcaatccatcgattagaaggcactgatgtggactct
caggttggcggtcttatttgtaagaccaaaagtgctgctagtgagcagcatgtcttcaag
gcccctgctccccgcccttcattgctgggactggacttgttggcttccctgaaaaggagg
gagagagaggagaaggatgatggggaggacaagaagaagtccagaatctcttcctacaag
gactgggaagagagcagggatgaccagagggatgccgaggaggagggcagtgaccaggct
ggccgaagcagccgaaaagacagacattatcgatctgctcgggtagagaccccatcccat
cctggtggtgtgagtgaagagttttgggaacgcagtcggcagagggagcgggagaggcgg
gaacatggtgtctatgcctcgtccaaagaagaaaaggatcggaagaaggagaggtctcgg
gatcgagactatgaccgcaaaagagacagagatgagcgggatagaagcaggcacagcagc
agatcagagcgggatggagggtcagagcgcagcagcagaagaagtgaacctgagagccca
cgacaccggccaaaagatgcagccaccccttcacggtctacctgggaggaggaggacagt
ggctatggctcttcaaggcgctcgcagtgggaatcgccctccccaacgccttcctatcgg
gattctgagcggaatcatcgggtgtccagtcgagatagggacaggtctgtgaggagcagg
tactcagatgacacacctctgccaaccccatcctacaaatacaatgagtgggctgatgac
agaaggcacctggggtccaccccacgtctgtccaggggccgaggaagacgtgaggatggt
gaagaaggaatttcatttgacacagaggaggaacggcagcagtgggaggatgaccagagg
caagctgaccgggactggtacatgatggatgaggggtacgatgagttccacaaccccctg
gcctactcctccgaggactacgtgaggaggcgggagcagcacctgcataaacagaagcag
aagcgcatttcggctcagcggagacagatcaatgaggataacgagcgctgggagaccaac
cgcatgctcaccagcggggtggtccatcggctggaggtggacgaggactttgaggaggat
agtgcagccaaggtgcatctcatggtgcacaacctggtccctccctttctggacgggcgc
attgtcttcaccaagcagccagagcctgtgattccagtcaaagatgccacttctgacctg
gccatcattgctcgaaaaggcagtcaaacagtgcggaagcacagggaacaaaaggaacgc
aaaaaggctcagcacaaacactgggaactggctggaaccaaattgggagatataatgggc
gtcaaaaaagaggaagagccggataaagctctgaccgaagatggtaaagtggactatagg
acagaacagaagtttgcagaccacatgaagaaaaagagtgaagccagcagtgaatttgca
aagaagaagtcgattctggagcagaggcagtacctgccgatctttgcggtgcagcaggag
ctgcttacgatcatcagagataacagcattgtgatcgtggttggggagacagggagtggt
aagaccactcagctgacccagtacttgcatgaagatggttacacggactatgggatgatt
gggtgcacccagccccgccgtgtggctgccatgtcagtagccaagagagtcagtgaagag
atggggggaaaccttggcgaggaggtgggttatgccatccgcttcgaagactgtacctca
gaaaacaccttgatcaagtacatgactgacgggatcctgctgcgagagtccctccgggaa
gcggacctggatcactacagtgccatcatcatggacgaggcccatgagcgctccctcaac
actgacgtgctctttgggctgcttcgggaggtggtggctcggcgctcagacctaaagctc
attgtcacatcggccactatggatgcagagaaatttgcttccttttttgggaatgtcccc
atcttccatatccctggtcgtaccttccctgttgacatcctcttcagcaagaccccgcag
gaggattatgtggaggccgcagtgaagcagtccctgcaggtgcacctttcaggggcccct
ggggacatccttatcttcatgcctggccaagaggacattgaggtgacctcagaccaaatc
gtggaacatctggaagaactggagaacgcgcccgccctggccgtgctgcccatctactct
cagctgccttctgacctccaggccaaaatctttcagaaggctccagatggtgttcggaag
tgtatcgttgccaccaacattgctgagacatctctgactgttgatggcatcatgtttgtt
atcgactctggttattgtaaactaaaggtcttcaaccccaggattggcatggatgctctg
cagatctaccctatcagccaggccaatgctaatcagaggtcagggcgagccggcaggacg
ggcccaggtcagtgtttcaggctctacactcagagtgcctacaagaacgagctcctgacc
accacggtgcctgagatccagcggaccaacctggccaacgtggtgctgctgctcaaatcc
ctgggggtgcaggacctgctgcagttccacttcatggacccgcccccagaggacaacatg
ctcaactccatgtatcagctctggatcctcggggccctggacaacacaggtggcctgacc
tcgactgggcgtctgatggtggagtttccactggacccagccctgtccaagatgctcatt
gtgtcctgtgacatgggctgcagctccgagatcctgctcattgtctccatgctctcggtc
ccagccatcttctaccggcccaagggccgagaggaggagagtgatcaaatccgggagaag
tttgcagtccctgagagtgaccatctgacctacctgaatgtctaccttcagtggaagaac
aataattactctaccatctggtgtaacgatcatttcatccatgccaaggccatgcggaag
gtccgggaggtgcgggctcagctcaaggacatcatggtgcagcagcggatgagcctggcc
tcgtgtggcaccgactgggacattgtcaggaagtgtatctgtgctgcctatttccaccag
gcagccaagctcaagggaatcggagagtatgtgaatatccggacaggcatgccctgccac
ctgcaccccaccagctccctctttggaatgggctacaccccagactacatagtctatcac
gagttggtcatgaccaccaaggagtacatgcagtgtgtgactgctgtggatggagagtgg
ctggcagagctgggccccatgttctacagcgtgaaacaggcaggaaagtctcggcaggag
aaccgccgacgggccaaagaggaagcatctgccatggaggaggagatggctctggccgag
gagcagctgcgggcccggcggcaggagcaggaaaagcgcagccccctgggcagtgtcagg
tccacaaagatctacactccaggtcggaaagagcaaggggaacccatgacccctcgccgc
acaccagcccgctttgggctctga
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integrated database retrieval system
