Camelus ferus (Wild Bactrian camel): 102518180
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Entry
102518180 CDS
T02979
Symbol
COL11A2
Name
(RefSeq) collagen alpha-2(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr04820
Cytoskeleton in muscle cells
cfr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102518180 (COL11A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102518180 (COL11A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfr00536
]
102518180 (COL11A2)
Glycosaminoglycan binding proteins [BR:
cfr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102518180 (COL11A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
102518180
NCBI-ProteinID:
XP_032318678
UniProt:
A0A8B8RL66
LinkDB
All DBs
Position
20:complement(21973543..22003391)
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AA seq
1736 aa
AA seq
DB search
MERCSRCHRLLLLVPLVLGLSAARAWAGAPPVDLLRALRFPSLPDGVRKARGICPSDVAY
RVSRPSQLSAPTRQLFPGGFPKDFSLLTTVRTRPGLQAPLLTLYSAQGVRQLGLELGRPV
RFLYEDQTGRPQPPAQPVFRGLSLADGKWHRVAVAVKGQSVTLIIDCKKRVTRPLPRNAQ
PVLDTLGVIIFGARILDEEVFEGDVQELVIVPGVQAAYDSCEQKELECERGWRERPQKQQ
SHRSQRSPKQQPSRLHRPQNQEPQQQSIESLYYDYEPPYYDVMTAGTTPDYQDPTPGGEE
GILESSPSPPPEEEQTDLQVPSTADRFLTEEYGEGGTDPPAGPYDYTYGYGDDYREETEL
GPALSAETAHSGAAARGPRGLKGEKGEPAVLEPGMLVEGPPGPEGPAGLTGPPGIQGNPG
PVGDPGERGPPGRAGLPGSDGAPGPPGTAFMLPFRFGSGGGDKGPVVAAQEAQAQAILQQ
ARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQGPRGPQGLTGPPGKAGRRGRA
GADGARGMPGEPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPGEDGERGDDGEIGPR
GLPGESGPRGLLGPKGPPGIPGPPGVRGMDGPHGPKGSLGPQGEPGPPGQQGTPGTQGLP
GPQGAIGPHGEKGPRGKPGLPGMPGSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPR
GVKGVDGIRGLKGHKGEKGEDGFPGFKGDMGVKGDRGEVGVPGARGEDGPEGPKGRTGPT
GDPGPPGLMGEKGKLGVPGLPGYPGRQGPKGSLGFPGFPGASGEKGARGLSGKSGPRGER
GPTGPRGQRGPRGATGKSGAKGTSGGDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKD
GLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERGHPGPPGPPGEQGLTGIA
GKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGAGLKGNEGPAGPPGPAGSPGER
GSAGSGGPIGPPGRPGPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVA
GEDGDKGEVGDPGQKGTKGNKGEHGPPGPPGPLGPVGQPGAAGADGEPGARGPQGHFGAK
GDEGTRGFNGPPGPIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPP
GGVGNLGPPGEKGEPGESGSPGVQGEPGVKGPRGERGEKGESGQPGEAGPPGPKGPTGDD
GPKGNPGPVGFPGDPGPPGESGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGPPGPLGKR
GPAGTPGPEGRQGEKGAKGDPGAVGAPGKTGSVGPAGPAGKPGPDGLRGLPGSVGQQGRP
GATGQAGPPGPVGPPGLPGLRGDAGAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGST
GQKGETGIPGASGPIGPGGPPGLPGPAGPKGAKGATGPAGPKGEKGVQGPPGHPGPPGEV
IQPLPIQMPKKTRRSVDGSRLMQEDEAMPTGGAPGSPGGLEEIFGSLDSLREEIEQMRRP
TGTQDSPARTCQDLKLCHPELPDGEYWVDPNQGCARDAFRVFCNFTAGGETCVTPRDDVT
QFSYVDSEGSPVGVVQLTFLRLLSVSAHQNVSYPCSGEARDGPLKLRGANEDELSPETSP
YVKEFRDGCQTLQGRTVLEVRTPVLEQLPVLDASFSDLGAPPRRGGVLLGPVCFMG
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggagcggtgcagccgctgccatcgtctcctcctgctagtaccgctggtgctggggctg
agcgcggctcgggcctgggcaggtgcgccccctgtggacttgcttcgggccctgagattc
ccctccctccctgatggtgtccggaaggcgagaggcatctgtccatctgatgtggcctac
cgagtgtcccgaccttcccagctcagtgcacccacccgccagctcttcccaggaggcttt
ccgaaagatttctctttgctgactaccgtccggacgcgccctggcctccaggctcccctg
ttgacactctacagtgcccagggtgtccgacagctgggcctggagcttggccgacctgtc
cgcttcttatatgaggaccagaccggccggcctcagcctccagctcagcctgtcttccga
ggcctcagcctagcagatggcaagtggcaccgtgtggctgtggctgtgaagggccagtct
gtcaccctcataattgactgcaagaaacgagtcacccggcccctcccccgaaatgctcaa
ccagtattggatacccttggagtgataatctttggtgctcgtatcttggatgaagaagtc
tttgagggtgatgtccaggaacttgtcattgtcccgggggtgcaagctgcctacgattcg
tgtgaacagaaggagctggagtgtgagaggggttggagagagagacctcagaaacaacag
tctcacagatcccagagatctccgaagcagcaaccatcaagacttcataggccgcaaaac
caggaaccccagcagcagtctattgagtctctctactatgactacgagcccccctattat
gatgtgatgactgcggggacaacccctgattatcaggaccccaccccaggtggagaggaa
ggaatcctggagtcaagcccctcgccaccccctgaggaggagcagacagatctccaggtc
ccctccacagccgacaggttcctgacagaggaatatggggagggtggcacagacccccca
gcagggccctacgattacacctatggctatggggacgattatcgtgaggagacggagctt
ggccctgccctctctgcggagacagcccactcaggagccgctgcccgtggaccccggggg
ctgaagggagagaagggggagcctgcagtgctggaacctggcatgctggtggaggggccc
cctggtccagaaggccctgcgggattgactggtccccctggcatacaaggcaatccaggc
ccagttggagaccctggcgagaggggtccccccggccgagcagggctccctggatcagat
ggggcccctggccctcccggcacagcctttatgctcccattccggtttggcagtggcggg
ggtgacaagggccccgtggtggcggcccaggaggctcaggcccaggcaattctgcagcag
gcacggctggcactccgtggaccccctggccccatgggatacacaggccgccctggaccc
ttgggacaacctgggagccctggcctgaaaggagaatctggagacctaggacctcagggt
cccagaggacctcagggcctcacaggccctcccggaaaggctgggcgaaggggccgagcg
ggtgctgatggagcccgagggatgcctggagaacctggagtgaagggcgaccgaggtttt
gatggactcccagggctacctggggagaagggacacaggggtgatactggtgcccagggc
cttcctgggcctcctggtgaggatggagagcggggagacgatggggagattggacctcgg
gggctgcctggagagtcgggacctcgaggtctccttggccccaaaggcccacctgggatt
cctggacccccgggagtccgaggcatggatggtccccatggtcccaaaggaagcttgggt
ccccagggagagccaggccctcctggacagcagggcactcctgggacccagggtctgccc
gggccccagggtgccattggccctcatggagagaagggtcctcgagggaaaccagggctc
cctggcatgcccggctcagatgggcccccgggtcaccccggcaaagaaggtccccctgga
accaaaggaaaccagggtccatctggacctcagggtcctctgggatacccgggacctcga
ggtgtcaagggtgtggatggaattcggggtctgaagggtcacaaaggtgaaaagggcgag
gatggctttcctggattcaaaggtgacatgggtgtgaaaggcgacaggggcgaggttgga
gttcctggtgccaggggagaggatggtcctgaggggccaaagggacgcaccggacccacc
ggagaccctgggcctcctgggcttatgggcgagaagggcaagctgggtgttcccggtctg
cctggctaccccggacgccagggtcccaaggggtccctgggatttcctggttttcctgga
gccagtggagagaagggagcccggggcctgtcagggaaatcagggcctcggggagagcgg
ggccccacgggtccacggggccagcggggaccccgaggtgccactgggaagtctggagct
aagggaacatcgggcggtgatggcccccatgggccccctggagagaggggtctccctgga
cctcagggccccaacggatttcctggccccaagggacctccgggtccccctgggaaggac
gggctgccaggacatccaggccagagaggagaagtgggtttccaagggaagactggcccc
cccggccccccaggagtggtaggaccccagggagctgcaggggaaactgggcccatgggg
gagagaggtcacccaggaccgcccggcccccctggagagcagggactgactgggatagct
ggaaaagaaggaacaaagggtgaccctggtccccctggggccccagggaaggacggtcct
gctggtctaaggggcttcccaggagaaagaggcctccctggcactgccggtggagctggt
ttgaaagggaatgaaggtccggctggtccccctggccctgcaggctcccctggggagcga
ggttcagcaggatctggaggacccattggccccccagggcgcccaggacctcagggcccc
cctggagctgcaggagagaaaggtgtcccgggtgagaagggccccattggtccaactggc
cgtgatggggttcagggtccggtggggcttcctggtcctgctggacccccaggtgtggca
ggagaggatggagacaagggtgaggtgggagaccctggacagaagggcactaaagggaac
aagggtgaacatggccctcctggaccccctggacccctcggtcctgtggggcagcccgga
gcagcgggagcagatggggagcctggagctcggggtccccaggggcattttggagccaaa
ggtgatgaaggaacaagaggattcaatgggcccccaggacccattggtctacagggtttg
ccaggcccctcaggagagaagggagaaacaggagacgtgggccctatgggaccacccggc
cccccaggacctcgaggcccagctggacccaatggagctgatggtccacaaggtccccca
ggaggtgttgggaacctgggtccccctggagagaagggggagccaggagagtcaggatct
cctggagtccagggcgagccaggtgtcaagggtccacgcggggagcgtggggagaaagga
gagtcagggcagccaggagaggcgggaccaccagggcctaaaggccccaccggcgatgat
ggccccaaagggaaccctggtcctgttggttttcctggtgaccctggtcctcctggagaa
agtggacctcggggccaggatggtgctaagggtgaccgtggagaggacggagagccagga
cagcctgggtcccctggtcccactggggagaatggacctcctggaccacttggaaagcgg
ggtcctgctggcacacctggtcctgaggggcgacaaggggagaagggggccaagggggat
cctggtgctgtgggtgccccggggaagacaggctccgtgggtcctgcaggcccagcagga
aaacctggtcctgatggtctgagggggctcccaggctcagtgggtcagcaaggccgtcct
ggggccacaggccaggccggacctccaggtcctgtgggacctccagggcttcctggcctc
cggggcgatgctggggccaagggagagaagggtcacccaggtctcattggactgattggc
ccccctggggagcagggagagaagggtgatcgaggacttcctggccctcagggctccact
ggacaaaagggagagactggcatcccaggagcatctggccctattggtcccggagggccc
cccggcctccctggacctgctggccccaaaggagccaaaggagccacaggcccagctgga
cccaagggagagaagggcgtccagggccctccaggacacccggggcccccaggcgaggtg
atccagcccctgcccatccagatgcccaagaagactcggcgctcagtggacggaagccgc
ctgatgcaggaagatgaggccatgccaactgggggggccccaggcagtcctggggggctg
gaggagatctttggctcactcgactccctgcgggaggaaattgagcagatgaggcgtccg
acagggacccaggacagccccgctcgcacctgccaggacctgaagctctgtcacccagag
ctgcccgatggagagtactgggtcgaccccaaccagggctgtgctcgggacgccttccgg
gttttctgcaattttacagcaggaggggaaacctgtgtgacgcccagggatgatgtcaca
cagttctcttacgtggactcagaaggctccccggtgggcgtggtccaactcaccttcctg
cggctgctcagcgtctccgcccaccagaacgtctcctacccgtgctctggggaggcccgg
gatgggcccctgaagctccgcggggccaatgaagacgagctgagcccagagaccagcccc
tacgtcaaggaattcagagacggctgtcagactctgcaaggccggacggtgctagaggtt
cgaacacctgtgctggagcagctgcctgtgctggatgcctccttctcagatctgggggcc
cccccaaggcggggaggggtgctgctggggcctgtatgcttcatgggctag
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integrated database retrieval system
