Camelus ferus (Wild Bactrian camel): 102518337
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Entry
102518337 CDS
T02979
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
cfr
Camelus ferus (Wild Bactrian camel)
Pathway
cfr04151
PI3K-Akt signaling pathway
cfr04510
Focal adhesion
cfr04512
ECM-receptor interaction
cfr04820
Cytoskeleton in muscle cells
cfr04974
Protein digestion and absorption
cfr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102518337 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102518337 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102518337 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102518337 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102518337 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102518337 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfr04147
]
102518337 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
cfr00536
]
102518337 (COL6A6)
Exosome [BR:
cfr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102518337 (COL6A6)
Glycosaminoglycan binding proteins [BR:
cfr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102518337 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
102518337 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Radical_SAM
Integrin_beta
Orbi_NS3
Motif
Other DBs
NCBI-GeneID:
102518337
NCBI-ProteinID:
XP_032345213
UniProt:
A0A8B8TTJ5
LinkDB
All DBs
Position
1:120396990..120565391
Genome browser
AA seq
2301 aa
AA seq
DB search
MQLSQAKIRFPVGDVSGYNMKMLLILFLVIVCSHVSINQHSGPEYADVLFLVDSSDHLGV
KSFPPVKTFISRMVSSLPIEADKYRVGLAQYSDELHAEFQLSAFRSRGAMLNHLKKNFGF
LGGSPRLGNALREAHRTYFSNGRDRKQFPPILVVLASAEPEDAVEEAAEALRKDGVRIVS
VGTQSVSEETLKAVATAQFHYRLRTVRDLGAFSLNMTQILKEAAQSTEGAVNDILVEVCQ
GPSVADVVFLLDVSVNGSWEDFDYLREFLEESVSALDVREHCMRVSLVAYSNETKVINPL
SRGVNKSVVLRDIQSLSPQAGKAYTGAALRKVRKEVFSAQNGSRKNQGVPQIAVLVTHHP
SEDNVTKAAASLRRQGVTIFTMGIEGASDAQLEKIASHPAEQYVSKLKTFSDLAAHNQTF
LKKLRNQITHTVSVVSERTATLKSGCADTEEADIYLLIDGSRSVQATDFQEMKTFLSEVI
GMFNIAPQKVRVGAVQYADRGDLEFDISKYTNKHDVGKAIENIRQMGGKTNTGAALNLTL
GLLQKAKRQRGGRVPCHLVVLTSGAAHDSVAEPAERLRQELVHVYAVGVKDANQTQLRQI
AGEDKRVYYVHDFDALKDIRNQVVQEICAEEACKEMKADIMFLVDSSGSIGLDNFIKMKT
FMKNLVSKSQIGADWVRIGVVQFSHVNKEEFQLDTYGSQGDITDAIDRMAHIGETTLTGS
ALTFVSQYFSPAKGARPSVRKFLILITDGEAQDAVKEPAVALRQEGIIIYSVGVFGSNVT
QLEEISGRPEMVFYVENFDILQHIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDQD
EYNTMKDFMVDLVKKADVGKNKVRFGALKYADDPEVLFYLDHLDTKWEVISVLRNDQPMG
GNTYTAEALGFSDHMFTEARGSRLDKGVPQVLIVITDGESHDADKLNATARALRDKGILV
LAVGIAGANPVELLAMAGSSDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVF
LMDGSNSIHPDDFRKMKDFLASIVEDLDVGADRVRVGAAQFSHTYRPEFPLGAWGGRQAV
SSRIARVQQIFGYTHIGAALRQVGRYFRPDAGSRIGAGAPQVLLVLTDGQSQDEVAQAAE
ELRHKGVDIYSVGIGDVDDQQLVQITGTADKKLTVHNFDELKKVKKRIVRNICTSGGESH
CFVDVVVGFDISTQQNGQTLLEGQSWMETYLQDTLRAISSLNGVSCEVGTETQVSVAFQV
TNALEKYSPKFEIYSENILNSLKDVTVKGPSLLNANLLSSLWEAFQNKSAARGKVVLLFS
DGLDDDVEKLEQRSDELRKEGLNALITVGLDGATSSHDLADLLYLEFGKGFEYRTQLTLG
MRDLGSRLSKHLVNVAERTCCCLFCKCIGGDGTVGDPGPPGKKGPPGFKGSEGYLGEEGI
AGERGAPGPVGEQGAKGCYGARGPKGHKGLNGQEGEVGESGIDGLNGEKGDDGLPGAKGE
KGDDGVQGIPGERGISGDHGAKGLRGDRGVPGFDNSIEGPTGLKGERGREGRRGWPGPPG
TPGSRRKTTAHGRRGHTGPQGEAGTPGPDGLAGSLGLKGPQGPRGEPGVKGEKGSLGSKG
PQGLPGPAGEAGSQGRWGSQGTKGEPGDLGEKGATGLRGPRGAAGGDGGPGYGSIGSKGA
KGQEGFPGESGPKGEEGDPGGPGETGPKGAGGKTVSAGLPGEPGSPGELGPPGRKGVKGA
KGLASFSTCDLIQYVRDHSPSRHGKPECPVHPTELVFALDQSRGVTEPEFVRMKEMMSSV
VRGLRVREHSCPAGARVAVLAYDSHARHLIRFSDAYGKDRLLREIQALPYERSSAGREVG
QAMRFVSRHVFKRALPGAHTRRVATFFSGGPSADPQTITTATLEFSALDIIPVVIAFTNV
PSVRRSFAIEDTGTFQVIMVPSGADYTPALEGLQRCTFCYDICNPDASCDQARPPPVQAY
VDAAFLVDSSRHVGRAEFEDIRGFLGALLDHFEVSPEPETSVTGDRVALLSYAPPGFLAR
SQGSPVRTEFNLTTYRSKRLMKRHVDESVQQLHGDAFLGHALQWALDNVFLKTPNLRRNK
VIFVISAGETSHLDRETLRKESWRAKCQGYALFVFSLGPSWSDQELEDLASFPLDHHLIQ
LGRIHKPDHSYGVKFLKAFMSSVRRAINKYPPINIRAKCSRLGAPDPQQPPRQLQSFLPG
PHKATLKEDALQKAKFFQYKKYFPRLVRGSRDDTVFTRNTSHTFKYGRRVVKTAPRPHDK
GSARTEELGLRKHAETLDAEN
NT seq
6906 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttagccaggcaaaaatcagatttccagttggcgacgtttcaggttataatatg
aaaatgctgctgattttgttcctcgtgatcgtatgttcccatgtttccatcaaccaacat
tctggccctgagtacgccgacgtgctgttcctggtggacagctccgaccacctgggagtg
aagtccttcccgccggtgaagacgttcatcagcaggatggtcagcagcctccccatagag
gcggacaagtaccgcgtggggctggcccagtacagcgatgagctccacgctgagttccag
ctcagcgccttcaggagccggggcgccatgctcaaccacctcaagaagaacttcgggttc
ctgggcggctccccgcgcctgggaaacgctctccgggaggcgcacaggacctacttctca
aacggaagggacaggaagcagtttcccccgatcctggtggtcctggcttcggccgagcct
gaggatgccgtggaagaggccgccgaggccctgcgcaaagacggggtgcggatcgtctcc
gtggggacgcagagtgtgtccgaggagaccctgaaggccgtggccacggcccagttccac
taccgcctccgcacggtccgagaccttggcgcgttctccctgaacatgacgcagatcctc
aaggaggcggctcagtccacggagggagctgtcaacgacatccttgtggaagtgtgccaa
ggcccctccgtcgctgacgtcgtgttcctgttggatgtgtccgtcaacggcagctgggag
gactttgactatcttcgagagttcctggaggaaagtgtgtctgcgctggacgtcagggag
cactgcatgcgggtcagcctggtggcctacagcaacgagaccaaggtgatcaaccccctg
agccggggcgtcaacaagtcggtggtgctccgggacatccagagcctctctccccaggct
gggaaggcctacactggagccgccttgagaaaggtccggaaggaggtctttagcgcacag
aacggcagtcggaagaatcagggggtcccgcagatcgccgtgctggtgacccaccaccca
tcagaggacaacgtgaccaaggcggccgcgagcctccggcgccagggggtgaccatcttc
accatgggcatcgagggggccagtgatgcccagctggagaagatagcatctcaccctgct
gagcaatacgtctccaaactgaaaaccttctccgacctggcagcccacaaccagaccttc
ctgaagaagctgcggaaccagatcacacacactgtctctgtggtctcggagcggacggca
accctcaaatccggttgcgcggacacggaggaagcagacatctatctgctcatcgatggc
tccaggagcgtccaggccactgacttccaggagatgaaaaccttcctgtcggaggtcata
ggaatgttcaacatcgctccccagaaggtgcgggtcggggccgtgcagtacgccgaccgc
ggagacttggagtttgacatcagcaagtacacgaacaagcacgacgtgggcaaggccatc
gagaacatccggcagatgggggggaagaccaacacgggtgccgccctgaatttgaccctg
ggcctcctgcagaaggccaagcggcagcggggaggccgcgtgccctgccacctggtggtc
ctgaccagcggcgcggcccacgacagcgtcgccgagcccgcggagagactgaggcaggag
ctggtccacgtctacgccgtcggggtcaaggacgcgaaccagacgcagctgcgccagatc
gcgggcgaggacaagcgggtgtactacgtgcacgactttgacgctttgaaagacatcaga
aaccaggttgttcaggagatctgtgctgaagaagcctgcaaggagatgaaggcagacatc
atgtttctggtggacagttctggcagtataggactggacaacttcatcaaaatgaaaaca
tttatgaaaaacctggtgagcaaatctcagattggggcagactgggtgcggatcggcgtg
gtccagttcagccacgtcaacaaggaagagttccagctcgacacatatgggtcccagggg
gacattacagatgccatagaccgaatggctcacattggagagaccaccttgaccggcagt
gccctgaccttcgtgtctcagtacttcagcccggccaagggggcccggcccagtgtcagg
aagttcctcatcctcatcacggatggtgaggctcaggatgccgtcaaggagccagcggtg
gcgctccggcaagaaggcatcatcatctactctgtgggcgtgttcggctccaacgtcacc
cagctcgaggagatcagcggcaggccggagatggtcttctacgttgagaattttgacatc
ctccagcacattgaagatgacctcgttttcgggatctgcagccctcgggaagagtgcaag
cgcattgaggttttggacgtcgtgtttgtgattgacagctctggcagcatcgaccaggat
gagtataataccatgaaggatttcatggtcgacttggtgaagaaagctgacgtgggcaag
aacaaggtccggtttggggctctgaaatacgccgacgacccggaggtgctgttctatctg
gaccaccttgacacaaaatgggaggtgatttcggtgctccggaatgaccagcccatgggg
ggcaacacctatacagccgaggccctgggcttctcagaccacatgttcaccgaagcccgg
ggcagccgcctggacaagggggtcccccaggtcctcatcgtgatcaccgacggggagtcc
cacgatgctgacaagctcaatgccacagccagggccttgcgggacaagggcattcttgtc
ctggccgtggggatcgcgggggccaaccccgtggagctgctggccatggcgggatcgagc
gacaagtacttcttcgtggaaactttcggaggcctgaaggggatattttcagacgtgtcc
gccagtgtgtgtaactcttcaaaagtagattgcgaaattgaaaaggtagatctcgtcttc
ctcatggatggctcgaacagcattcacccggacgacttccggaagatgaaggacttcttg
gcgtccatcgtggaagacctcgacgtgggcgccgacagagtgcgcgtaggcgcggcgcag
ttcagccacacctaccggcccgagttcccgctgggcgcctggggcggccggcaggcggtg
tcctcgcgcatcgcgcgcgtccagcagatcttcggctacacgcacatcggcgccgcgctg
cggcaggtgggccgctacttccggccggacgcgggcagccgcatcggtgcgggcgccccg
caggtgctgctggtcctcaccgacggccagtcccaggacgaggtggcccaggcggccgaa
gagctgagacacaagggcgtcgacatctactccgtgggcatcggggatgtagatgaccag
cagctcgttcagatcaccgggaccgcggataaaaaactgaccgtccacaacttcgacgaa
ctgaagaaggtcaagaagaggatcgtgcgcaacatctgcacctcggggggcgagagccat
tgttttgtggacgtcgtggtgggatttgacatctcaactcagcagaatgggcagaccttg
ctggaaggtcagtcttggatggaaacctacctgcaagacaccttgcgtgccatcagctcc
ctcaatggggtaagctgtgaggtgggcacggagactcaggtaagcgtggcttttcaagtg
accaacgccctggaaaaatactcccccaagtttgagatctacagtgaaaacatactgaac
agtttaaaggatgtaacagttaaaggaccgtctcttctcaacgccaacctcttgagttct
ctgtgggaggcatttcagaataaatcagctgctcggggaaaggtggttctcttgttttca
gatggattggatgatgatgttgaaaaacttgaacagagatctgatgaacttaggaaagaa
ggcctcaatgctctcatcactgttggtctggatggagccaccagctcacatgacctggct
gaccttctctaccttgagtttgggaagggatttgagtataggacccagctcactctcgga
atgagggatcttgggagccggctgtcaaagcacctggtcaatgttgcagaaaggacatgc
tgctgtctgttctgcaagtgcattggaggagatggtaccgtgggagaccctggaccacca
ggaaaaaagggacccccaggctttaaaggcagtgaaggctacctgggagaggaaggcatt
gctggagaaagaggagcgcctggaccagtgggagagcagggcgctaagggatgctatggc
gcccggggtccgaagggacacaagggactaaatggacaggagggagaagttggggaaagc
ggaattgatgggttaaatggagaaaagggtgacgatggtctccctggagcaaaaggagaa
aaaggtgatgatggagtccagggaatcccaggagagagagggatttccggggaccatgga
gcaaagggcctgcgaggagatcgtggcgttcctggatttgacaatagcatagaaggaccc
acgggcttgaaaggagaacgtggaagagaagggagaagaggctggccaggccccccagga
acaccgggctccagaagaaagacaacagctcatggccggaggggacatacaggcccacag
ggggaagcaggcaccccgggcccagacggacttgcaggctccctgggacttaagggccct
cagggcccaagaggagagcctggtgtgaaaggagagaaaggaagtctgggaagtaaagga
ccccaggggcttccaggacctgcgggagaggcagggagtcaaggccgatggggaagccaa
ggaactaaaggggagcccggtgacctgggagaaaagggagccactggccttcggggacct
cgaggcgctgcgggcggtgatggcggcccgggttatggcagcatcggcagtaaaggagca
aaggggcaggaaggattccctggagaaagtggacccaagggtgaggagggcgaccctggc
ggtccaggagaaacgggacccaagggagctggaggcaagacggtgtccgcggggcttcca
ggagaaccgggatcccctggggagctgggacctcctggacgcaagggtgtcaagggggcc
aaaggattggcttcattctccacgtgtgacctcattcagtatgtgcgggaccacagcccc
agcagacacgggaaacccgagtgccccgtgcatcccaccgagctggtgttcgcgctggac
cagtcccggggcgtcacggagccggagtttgtgcggatgaaggagatgatgtcctccgtg
gtgcggggcctccgggtccgggagcacagctgccccgcaggcgcgcgcgtggccgtcctc
gcctacgactcccacgccaggcacctcatccgcttctcggacgcctacgggaaggaccga
ctcctccgggaaatccaggcccttccttacgagcggtcctcagccggccgggaggtcggc
caggccatgaggttcgtctccaggcacgtgttcaagcgcgcgctcccgggcgcgcacacc
cgccgggtcgccaccttcttcagcggaggcccgtccgccgacccccagaccatcaccacg
gccaccttggagttcagcgccctggacatcatcccagtggtgatcgccttcaccaacgtg
ccctccgtccggcgctcgttcgcgatcgaggacactggcacattccaggtcatcatggtt
ccgtccggagcggattacacgccagcgctggagggcctgcagcggtgcactttctgctac
gacatatgcaacccggatgcttcttgcgatcaggccagaccacctcccgtgcaggcttac
gtggatgctgcgttcctggtggacagctcccggcacgtggggagggcggagtttgaagac
atcaggggcttcctgggcgcgctgttggatcactttgaagtcagcccggagcccgagacc
tctgtcactggagaccgggtggccctcctgagctacgctccccctggcttcctcgcccgc
tctcaggggagtcccgttaggactgagttcaacctcaccacctacaggagtaaacgtctc
atgaagaggcacgtggacgagtcggtgcagcagctccacggagatgctttccttggccac
gccctgcagtgggctctggacaatgtcttcctaaagacacccaacctgaggagaaacaaa
gtcattttcgtgatatcagcgggggaaaccagtcacctggacagggaaaccttgaggaaa
gaatcctggagagccaagtgtcaaggttatgctctctttgtgttctccctgggcccttcg
tggagtgaccaggaactggaggacctagccagcttccctctggatcaccatctgatccag
cttggccgcatccataaacctgaccacagttatggcgtgaagtttttgaaggcttttatg
agctccgtcaggcgcgcgatcaacaaatacccaccgataaacatcagagcaaagtgcagc
aggctgggcgccccggatccgcagcagcccccacggcagcttcaaagctttcttcctgga
ccacataaagctaccctcaaagaagatgcactgcagaaggcaaaattctttcaatataaa
aaatactttccaagattagtaagaggcagcagagatgatactgtttttaccagaaacaca
tctcatacctttaaatatggaagaagggtggtaaaaactgctcccagaccacatgataaa
ggaagtgctcgaacagaagaacttggcctcaggaagcacgctgagactctggacgcagag
aactaa
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integrated database retrieval system
