KEGG   Camelus ferus (Wild Bactrian camel): 102521942
Entry
102521942         CDS       T02979                                 
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
cfr  Camelus ferus (Wild Bactrian camel)
Pathway
cfr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102521942 (SNRNP40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfr03041]
    102521942 (SNRNP40)
Spliceosome [BR:cfr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    102521942 (SNRNP40)
 Complex C
   U5 SnRNP specific factors
    102521942 (SNRNP40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_Vps41 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_RIG_1st Cytochrom_D1 WD40_like WDR54 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 102521942
NCBI-ProteinID: XP_006176232
UniProt: A0A8B6Y7Z3
LinkDB
Position
13:complement(21851334..21881652)
AA seq 358 aa
MIEQQKRKGPELPLVPVKRQRHELLLGAAGSNPGAGQQQAAPGALLQAGPPRCSSLQAPI
MLLSGHEGEVYCCKFHPSGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT
DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW
DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT
GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK
IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgatagaacagcagaagcgcaagggcccagagttgccgctggtcccagttaagcggcag
cggcatgaattgctgttgggagcagcggggtcgaaccccggagccgggcagcagcaggcg
gcgccgggagctttgctgcaagcggggcctccaagatgttcctctcttcaagccccaatc
atgcttctttcaggacatgaaggggaggtgtattgctgcaagtttcatcccagtggatcc
accttagcatctgcaggatttgaccgactgattttgttgtggaatgtctatggtgactgt
gacaactatgctacattgaaaggacacagtggagcagtgatggaactgcattataacaca
gatgggagtatgctcttctcagcatccacagataaaactgtggctgtgtgggacagtgaa
acaggcgagagggtcaaaagactgaagggacacacttcctttgtgaattcctgttatcca
gccaggaggggcccccagcttgtctgcactggcagtgatgacggtacagttaagctttgg
gacatccgtaagaaagcagccatccagacatttcagaacacctaccaagtgttagctgtg
accttcaatgacacaagtgatcagattatttctggtggaatagacaacgatatcaaggtc
tgggacctgcgccaaaacaagctgacgtacacaatgagaggccacgcagattcagtgact
ggcctgagtttaagttctgaaggctcttatctcttatccaatgcaatggacaatacagtg
cgggtctgggatgtccggccgtttgctcccaaagagaggtgtgtgaagatatttcaagga
aatgtacacaactttgaaaagaatcttctgagatgttcttggtcacctgatggaagcaag
atagcagctggctcagccgacaggtttgtgtatgtgtgggataccacaagcaggaggatt
ttgtataaactaccgggccacgctggctccatcaatgaagtggctttccaccctgacgaa
cccatcattctctcagcatccagtgacaagagactatatatgggagagattcagtga

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