Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase, subunit B
|
KO |
|
Organism |
cft Campylobacter fetus subsp. fetus 04/554
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Brite |
KEGG Orthology (KO) [BR:cft00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cft03032]
CFF04554_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:cft03400]
CFF04554_0003 (gyrB)
Enzymes [BR:cft01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CFF04554_0003 (gyrB)
DNA replication proteins [BR:cft03032]
Prokaryotic type
DNA Topoisomerases
CFF04554_0003 (gyrB)
DNA repair and recombination proteins [BR:cft03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFF04554_0003 (gyrB)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2527..4848
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AA seq |
773 aa
MENLEKNYGAGNIKVLKGLEAVRKRPGMYIGDTNISGLHHMIYEVVDNSIDESMAGYCDT
INIELTREGSCIVTDNGRGIPVDIHPTEKISAATVVLTVLHAGGKFDKDTYKVSGGLHGV
GVSVVNALSKKLILNIKRDGNLYRQEFSKGIPQNILEAVKTTNRTGTSVEFWPDDDIFEV
TEFDKQILSKRFKELAYLNPKITINFKDQRDGFSETYHFEGGLESFVTDINKSNPVSKAV
SFSGGEEDVIVDFALLYNETYTENLLSFVNNIKTPDGGTHEAGFRAGLTRAITNYIAANA
AAREKDTKITGDDIREGLIAIVSVKVPEPQFEGQTKGKLGSSYVKPIVQKMTFDVLCKYF
EENPIEAKAIMNKALMAARGREAAKKARDLTRKKDSLNSVGTLPGKLADCQSKDPSESEI
YLVEGDSAGGSAKQGRDRAFQAILPLRGKILNVEKSRLDKILKSEEIKNMITAFGCGIGE
EFDPEKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFLTPIIENGYVYLAQPPLYRYKKGK
KEIYLKDEKALNEFLIETGIEGEDFEGVGNKDLIDYLKIIAAYRSILMDLKKRFNVLIVI
RYMIENPDVIAKNYNELFEIIKKKLEDEKFNILNSYVNEDEIRIYVQTENGLEELVINDN
LFANPLYEEAVHIFTKMKERDIDLKRDPVEVLEDIEKNAKKGAYIQRYKGLGEMNPSQLW
ETTMNPENRRLLKIDVSNLQTASEIFELFMGDEVEPRRDYIQAHAKDVKHLDV |
NT seq |
2322 nt +upstreamnt +downstreamnt
atggaaaatttagaaaaaaattatggtgctggaaatataaaagtactaaaagggcttgaa
gctgtaagaaaacgtccaggaatgtatatcggcgatacaaatattagcggtcttcatcat
atgatttatgaagtagttgataactctatagacgaatctatggcaggttactgtgatacg
ataaatatagagcttacaagagaaggttcttgtatagttactgataatggtcgtggaatt
cctgttgatattcatcctacagaaaaaatttcagcagcaacagtagttttaactgtactt
cacgcaggtggtaaatttgataaagatacttataaagtttcaggaggacttcacggtgtt
ggagtttcggttgtaaatgctctttcaaaaaaactaattcttaacataaaaagagatgga
aatttatatcgtcaagagttttcaaaaggaataccccaaaatattttagaagctgtaaaa
actacaaatcgaacaggaactagtgttgagttttggcctgatgatgatatatttgaagta
actgaatttgataaacaaattttatcaaaaagatttaaagaattagcatatttaaatcca
aaaattactataaattttaaagatcaaagagacggttttagtgaaacttatcattttgaa
ggtgggcttgaaagttttgttacagatataaacaaaagtaatccagtaagcaaagcagtt
agttttagcggtggtgaagaagatgttatagtggattttgctctactttataatgaaaca
tatacagaaaatttactaagtttcgtaaacaatataaaaactccagatggtggaactcat
gaagcaggttttagagctgggcttacaagagctattacaaattatatagctgcaaatgct
gcagctcgtgagaaagatactaagataaccggagatgacataagagaaggacttatagct
atagttagcgtaaaagttccagaaccacaatttgaaggtcaaactaaaggaaaactcggc
tcgagttatgtaaaacctatcgttcaaaaaatgacttttgatgttttgtgtaaatatttt
gaagaaaaccctatcgaagcaaaagctataatgaataaagctcttatggctgctcgtggt
cgtgaagcagctaaaaaagcaagagatttaacacgcaaaaaagatagtttaaatagcgta
ggaacgcttcctggaaaattagctgattgtcaaagtaaagatccaagtgagagtgaaatt
tatcttgttgagggagattctgctggaggctctgcaaaacaaggtcgtgatagagcgttt
caagcgattttaccacttcgaggtaagatattaaacgtagaaaaaagtagacttgataaa
attttaaaatcagaagagataaaaaatatgataaccgcatttggatgcggaattggtgaa
gagtttgatcctgaaaaacttagatatcataagataattattatgactgatgcggacgta
gatggaagccatattcaaactttacttcttacttttttctttaggtttttaactccgatc
attgaaaatggttatgtttatctagctcagccgcctctttatagatacaaaaaaggtaaa
aaagagatctacttaaaagatgaaaaagctttgaatgaatttcttatagaaactggaatt
gaaggtgaggattttgaaggtgttggaaataaagatctgattgattatttaaagataatc
gcggcttatagaagtattttgatggatcttaaaaaacgttttaacgtactaatcgttata
agatatatgatagaaaatccggatgttatagcaaaaaattataatgaactttttgagatt
ataaagaaaaaacttgaagatgaaaaatttaatattttaaattcatacgtaaatgaagat
gagattaggatatatgttcagactgaaaatgggcttgaggaacttgttataaatgacaat
ttatttgcaaatcctctttatgaggaggctgttcatatatttacaaaaatgaaagagcgt
gatatagatctaaaaagagatccagtagaagtgcttgaagatatagaaaaaaatgctaaa
aaaggtgcttatatacaacgttacaaaggtcttggagagatgaatcctagtcaactttgg
gagacaactatgaatccagaaaatagacgacttttaaaaatagatgttagcaatcttcaa
acagctagtgaaatttttgaactctttatgggtgatgaggttgaacctagacgagattat
atacaagctcatgcaaaagatgtaaaacatctggacgtttaa |