Campylobacter fetus subsp. fetus 04/554: CFF04554_0384
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Entry
CFF04554_0384 CDS
T03330
Symbol
addB
Name
(GenBank) AddAB recombination complex, helicase AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cft
Campylobacter fetus subsp. fetus 04/554
Brite
KEGG Orthology (KO) [BR:
cft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cft03400
]
CFF04554_0384 (addB)
Enzymes [BR:
cft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFF04554_0384 (addB)
DNA repair and recombination proteins [BR:
cft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CFF04554_0384 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
AIR78331
LinkDB
All DBs
Position
353737..356097
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AA seq
786 aa
AA seq
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MNYTPNRILNVLSSSRNVREFYIVNSRSNSLVSKAITIARFEQQIVIVPNLKKASQIDRL
LIMQKAAKSVQNISSVINVGSQFFAFLKNSDYLFSFFKELKREFVSIKDLVRSDTYANYD
EHLSILEELLKLYLIMLKEAGFYDDISLPDEYQINYDFIKNYDEIKIKLDGIFSKLDWYI
LCEISKYVSVIIEFSSSKFNQKTIESISEICETSFEIGFDYVLNLSRKTVISKVKIEKNT
DIKLKSFSIRSLQCAYVFDEISNFVRCGIDPKKIAVVLPDESFYEILKNADERNMLNYAM
GKSFTTEPVFVLLNTLKSALDQDLVYEYDESYLSKNSSLDSLISALNYFKFDTDLYSNLN
KIYNQSCDFDRFNSAISSIISKFTLSIEVKTILLNEAFLIGALLQNTSLRFGSLFEIFLM
NLKEAKLSIVGGAEVTVIGVLESRSGNYDGVIIIDFNDDIVPKRSQKEMFLSSSVRKKAG
LISHQDRENLQRFYYESLINRAKKVSISYLSDEESILSRFARDFSFRIDEKYTQNAYLNS
LKSGGIKLSLEKKDIYLRHDFFATELSFSRLNTYLACKRKYYYRYILGIKEYRGFDKDIS
SHLGSTIHSALQEYFSKFKTKFVKKKFLELFKKYENTIDTLDSEIFKAGLAKFEESQNTH
FNSGFSVFECEKELKNEFCGVKITGKIDRIDKSADTFMLIDYKSGTVPKKSFQLSFYEAL
FGHNSISFYYDIKNEYKFIPNDTNTDELAQCINGLKDEFKNEVCFDRNEKACQYCAYFVF
CKKELK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatacgccaaataggattttaaacgtccttagctcatcaagaaatgttcgtgag
ttttacattgtaaattcacgctcaaactctttagtctccaaagctataactatcgctcgg
tttgaacaacaaattgttatagttccaaatttaaaaaaagctagtcaaatagatagactt
ttaataatgcaaaaggctgcaaaaagcgtacaaaatatctccagtgtgataaatgtagga
tcgcagttttttgcatttttaaaaaatagcgattatttattttccttttttaaagagtta
aaaagggaatttgtgagcataaaagatcttgttaggagcgatacgtatgcgaattatgat
gagcatctaagcatacttgaggagcttttaaaactttatcttattatgcttaaagaagcc
ggattttacgatgatatctctcttcctgacgagtatcaaataaattatgattttataaag
aattacgatgagatcaaaataaaactagacggtatattttcaaaattagactggtatata
ctttgcgagatttcaaaatacgtaagtgttattatagagtttagttcaagtaaatttaat
caaaaaactatcgaaagcataagcgaaatttgtgaaactagttttgagatcggctttgat
tatgttttaaatttgagccgaaaaacagttatttctaaggtgaaaatagaaaaaaataca
gacataaagctaaaaagtttttctataagaagtttgcagtgtgcttatgtttttgacgag
atttctaattttgtacgctgcggaatagatccaaaaaagatagccgtggttttaccagat
gagagtttttatgagattttaaaaaatgcagatgagcgtaatatgctaaattacgctatg
ggaaaaagttttacgactgagccggtatttgttcttttaaatacactaaaatctgccttg
gatcaagatttagtttatgaatacgatgaaagttatctatcaaaaaatagtagtcttgat
agcttgatttcggctttaaattattttaaatttgatacggatctttattcaaatttgaat
aaaatatataatcaaagttgtgattttgataggtttaattccgctatttctagtattatt
tctaaatttacattgagtattgaagtaaaaactattttgttaaatgaagcgtttttaata
ggcgcgcttttacaaaatacatctcttagatttggaagtttatttgagatatttttgatg
aatttaaaagaagcaaaattaagtattgtaggtggcgcagaagtcactgtaataggtgtt
ttagaaagtagaagcggaaattatgatggggtaattattatagattttaatgatgatatt
gttccaaaacgtagccaaaaggagatgtttttaagctcatctgtgagaaaaaaagcggga
ctcatcagccatcaagatagagaaaatttacagagattttattatgaaagcctcataaat
cgtgcaaaaaaagtaagcatatcatatcttagcgacgaagagtctatattgtcgcgtttt
gctagggatttttcttttagaatcgatgaaaaatatactcaaaatgcgtatctaaactca
cttaaatcaggcggaataaagcttagtttagaaaaaaaagatatctatttaagacatgat
tttttcgctacggagttatcatttagccgccttaatacttatcttgcttgtaaaagaaag
tattattaccgttatattttgggcattaaggaatatcgtggatttgataaagatatttca
agtcatttaggaagtacaattcactctgctttgcaagaatatttttctaaatttaaaact
aaattcgtgaaaaaaaagtttttagagttatttaaaaagtatgaaaatacaatagatacg
ctagatagtgaaattttcaaagccggattagcgaaatttgaagagagtcaaaatactcat
tttaactccggatttagcgtttttgagtgtgaaaaagagcttaaaaacgagttttgcggt
gttaagatcaccggtaaaatagacagaatagataaaagtgcagatacttttatgcttata
gattataaaagcggaacagtgcctaaaaaatcttttcaactatcattttatgaagcttta
ttcggacacaatagtatatcattttactatgatataaaaaatgagtataaatttatacca
aatgatactaatacggatgagctagcacagtgtataaacggtcttaaagatgagttcaaa
aatgaagtttgttttgatagaaatgaaaaagcgtgccaatactgtgcgtattttgttttt
tgcaaaaaggaactaaaatga
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