Campylobacter fetus subsp. fetus 04/554: CFF04554_0494
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Entry
CFF04554_0494 CDS
T03330
Name
(GenBank) hypothetical protein, putative ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cft
Campylobacter fetus subsp. fetus 04/554
Pathway
cft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFF04554_0494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cft03019
]
CFF04554_0494
Messenger RNA biogenesis [BR:
cft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFF04554_0494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
HDOD
KH_1
KH_2
DUF4945
MurD-like_N
KH_KhpA-B
DUF5680
Motif
Other DBs
NCBI-ProteinID:
AIR78439
LinkDB
All DBs
Position
500189..501682
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AA seq
497 aa
AA seq
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MAKKINDANYSIFLEQAKAKAKAIEFEAESILKDAKVKVNEAEFEAKKRYEEKGSRLQKE
YNQKLDDISKKEHAILNEQEILKNSKDELEKSQNQAKTLYEEGLNLKIAYQDKLSETLKV
LEHVAGLTEDEAKNMVLRKVEEKSRAEIAHIVRKYEEEAKKEAKKRANYILAQATSRYAG
EFAAERLINVVNIKNDELKGRIIGKEGRNIKTLEMVLGVDVIIDDTPHAIILSSFNLYRR
AIATRVIELLVEDGRIQPARIEEIHKKVCDEFEASILEEGENILIDLGISKVHPEIVKLI
GKLKFRASYGQNALAHSLEVAHLSGIIAAETGGDEKLAKRAGILHDIGKALTHEYEGSHV
DLGAEICKRYKEHPVVINAIYAHHGHEEALSVECAAVCAADALSAARPGARREVLESFLK
RVEEIESIAISKEGIKGAYAINAGREIRVIANAKLVNDDEAVLLAKEIAEEIQDKIQYPG
EIKVNVIRELRAIEFAK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaaaagataaatgatgcaaattatagtatctttttagaacaggcaaaagcaaaa
gcaaaagccatagaatttgaagctgaaagtatcttaaaagatgctaaagttaaggtaaat
gaggctgagtttgaagctaaaaaacgttatgaagaaaaaggcagtagacttcaaaaggag
tataatcaaaagctagatgatatctctaaaaaagagcatgctattttaaatgaacaagaa
attttaaaaaatagcaaagacgagttagaaaaatctcaaaatcaagcaaaaactctttat
gaggagggtttgaacttgaaaattgcatatcaagataaacttagcgaaactttgaaagta
ctagaacatgtagcaggtctcactgaagatgaggctaaaaatatggttttaagaaaagta
gaagaaaaaagcagagccgaaatagcacatatcgttagaaaatacgaagaagaagcgaaa
aaagaagcgaaaaaaagagcaaattatatattagctcaagctactagcagatatgcagga
gagtttgcagctgaacgtttaataaatgttgtaaatatcaaaaatgatgagcttaaaggt
cgtattataggaaaagagggcagaaatatcaaaactcttgaaatggtgcttggagtagat
gttattatagacgatactcctcatgctattattttgtcgagttttaatctatatagacga
gcgatagctactagagtgattgaacttttggttgaagatggaagaattcaacctgcaaga
atagaagaaattcataaaaaagtctgtgatgagtttgaagcaagtatacttgaagaaggt
gaaaacattcttatagatcttggtattagcaaagttcatccggaaattgttaaattgata
ggaaaacttaaatttagagctagttatggccaaaatgcacttgctcatagtctcgaagtt
gcacatttatctggcattatagcagcagagaccggcggagatgaaaagttggcaaaaaga
gccggaattttacatgatataggaaaagctttaactcatgaatatgaaggaagtcatgtt
gatttaggagccgaaatttgcaaacgctataaagagcatccggttgtcataaatgctatt
tatgctcaccatgggcatgaggaggctttaagtgtagaatgtgccgcagtatgtgcagcg
gatgcactttctgcagcacgtcccggagctagaagagaagttcttgagagcttcttaaaa
agagtagaagagatagaatcgatagcaataagcaaagaaggaataaaaggtgcttacgct
ataaatgctggtcgagagataagagttatagcaaatgcaaagcttgtaaatgacgatgaa
gcggtacttttagcaaaagagatagctgaagaaattcaagataaaattcagtatccgggt
gaaataaaagtaaatgttatcagagagcttagggctatagaatttgctaaataa
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