Campylobacter fetus subsp. fetus 04/554: CFF04554_0541
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Entry
CFF04554_0541 CDS
T03330
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cft
Campylobacter fetus subsp. fetus 04/554
Pathway
cft03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFF04554_0541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cft03400
]
CFF04554_0541
Enzymes [BR:
cft01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CFF04554_0541
DNA repair and recombination proteins [BR:
cft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFF04554_0541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIR78480
LinkDB
All DBs
Position
complement(551192..551833)
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AA seq
213 aa
AA seq
DB search
MSNNNILYQLYFYKAIGYKFINRAEISEILTYKNNFSNLKRLEEQIKNCNLCELCKSRNK
AVLGGKEASSNVMLVENFPSFDEDKNGSAAFNDELKECLNLAQIDIQKLYFTHMLKCRPK
DDMILKDTWYDQCYSYFEQEFDIVKPKLIISFGKDVFFRITKDRNCAFESVRGGIFKFKN
SLIMPTYSAFWIIKNPSHKQKFIDDLKKIKGYL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataataatattttataccaactatatttttataaggcaattggatataaattt
ataaatagagctgaaatttcagagattttaacttataaaaataatttttcaaatttaaaa
agattagaagagcagataaaaaattgcaatctttgcgaactatgcaaaagtagaaataaa
gctgttttagggggtaaagaagcatcttctaatgttatgttggtagagaattttcctagt
tttgatgaagataaaaacggatctgctgcttttaatgatgagttaaaagagtgcttaaat
cttgctcaaatcgatatccaaaagctatattttactcatatgctaaaatgcagaccaaaa
gatgacatgatcctaaaagatacgtggtatgatcagtgttattcttactttgagcaagaa
tttgatatagtaaaaccaaaacttatcattagttttggtaaagatgttttttttaggatt
acaaaagatagaaattgcgcttttgagagtgtgcgaggcggtatttttaaatttaaaaat
agtcttatcatgccgacttattcggctttttggatcattaaaaatcctagccataaacag
aaatttatagatgatttaaaaaaaattaaaggatatttatga
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