Campylobacter fetus subsp. fetus 04/554: CFF04554_0876
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Entry
CFF04554_0876 CDS
T03330
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cft
Campylobacter fetus subsp. fetus 04/554
Pathway
cft03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFF04554_0876 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cft03400
]
CFF04554_0876 (uvrB)
DNA repair and recombination proteins [BR:
cft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFF04554_0876 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFF04554_0876 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Kinesin
UB2H
Microtub_bd
DUF1574
AAA_22
AAA_16
Focal_AT
T2SSE
Flavoprotein
HAAS
AAA_7
DUF87
Motif
Other DBs
NCBI-ProteinID:
AIR78790
LinkDB
All DBs
Position
877069..879045
Genome browser
AA seq
658 aa
AA seq
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MDKFEISSKFKPSDDQEKAVTNIVDSIRSGNKFNVLLGVTGSGKTFTMANVIKRLNMPTL
IMTHNKSLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIPRQDLFIEKDSSINEELER
LRLSATANLLEFDDVVVVASVSANYGLGNPAEYKGMVLLLSLGMSLNQKELLLKLVDMGY
KRNDAYFDRGDFRVNGDVVDIYPAYFNDEAIRLEFFGDELDAMYHFDVLENKRTKDVSKF
ILYATSQFIVGENRLKQAIKDIELELEDRLAFYEKENRLVEYQRLKQRVEFDLEMLSSTG
STKGVENYARYLTGQKAGETPYSLFDYFEVSGKDYLVIVDESHVSLPQFRGMYAGDRSRK
EVLVEYGFRLPSALDNRPLKFDEFIAKKANYLFVSATPNQYEIDLSQGHVYEQILRPTGL
LDPRIEVISSDNQVEVLFDRAKAVIARGERVLVTTLTKKMSEELTRYYQELGIKVKYMHS
DIDAVERNELIRGLRKGEFDMLVGINLLREGLDLPEVSLVAVLDADKEGFLRSRTSLIQI
MGRAARNVNGTVILFANKITNSMKEAIDTTEARRKYQGDYNKKYGITPRSASRNLEDSLK
EEDLPNLYNKAKKLEKMPASERAKIVKELRKQMLEAAKNLEFEKAAALRDEIAKLREL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttgagatatctagtaaatttaagccaagcgatgatcaagaaaaagccgta
acaaacatagtagatagcataagatccggaaataaatttaacgtccttttaggagtaact
ggaagcggtaaaacttttacgatggcaaatgtgataaaacgcctaaatatgccgactctc
atcatgacacacaacaaaagcttagccgcgcagctttatagcgaattcaaaggctttttt
cctaaaaatcacgtcgagtatttcataagctactatgattactaccaacctgaagcctat
ataccgcgccaagatctttttatagaaaaagatagctctataaatgaagaattggagcgt
ttaagacttagtgcgactgcgaatttgcttgagtttgatgatgtggtagtcgtggcttcc
gtatctgcaaactacggtttaggaaatcctgctgaatataaaggtatggttttactgctg
agtttaggtatgagcttaaatcaaaaagagttacttttaaaactagtagatatgggatat
aaaagaaacgatgcgtactttgatcgtggagattttcgagtaaatggtgacgtggtagat
atctatccggcgtattttaacgatgaagccatcagacttgagttttttggagacgagctt
gacgctatgtatcactttgacgtattagaaaacaaacgcactaaagacgttagcaaattt
atactatatgcaacaagtcagtttatagtcggcgaaaatagactaaaacaagcgataaaa
gatatcgagcttgaacttgaagataggcttgcattttatgaaaaagaaaatagattagtc
gagtatcaaaggcttaagcaaagagtggaatttgaccttgagatgctctcaagcaccgga
agtaccaaaggcgtagaaaattacgcgcgttatctaacagggcaaaaagcaggagagacg
ccgtattctttgtttgattactttgaagtgagcggcaaggactatcttgttatagtagat
gaaagccacgtgagtttgccacaatttcgcggaatgtacgcaggcgatagaagtagaaaa
gaggttttagtcgagtacggtttcagacttccttctgcgcttgataacagacctttgaaa
tttgatgagtttatagcaaaaaaggcaaactatctgtttgtctcagccactccaaaccag
tatgagatagatctctcacaaggtcatgtttatgagcaaatacttaggcctaccggactt
cttgatccacgcatagaagtcataagtagcgataatcaagtagaagttttgtttgatagg
gcaaaagcagtcatagcaagaggcgaaagagtgctagtaacgactctaactaaaaagatg
agtgaagagctaacgcgctactaccaagaacttggtatcaaggtcaaatacatgcactca
gacatcgacgcagtcgaaagaaacgagcttataagaggtcttagaaaaggggagttcgat
atgcttgttggtataaatttactccgtgaggggctagatctaccagaagtctctttggta
gctgttttagacgccgacaaagagggctttttaagaagtcgtacaagcctcatacaaatt
atgggaagagcagctagaaacgtaaatggaacggttatattatttgcaaataaaataaca
aattctatgaaagaagccatagatacaactgaagcaaggcgtaaatatcagggcgattat
aacaaaaagtacggtataactccgcgctcggctagtagaaatttagaagatagcttaaaa
gaagaagatctaccaaatttatataacaaagccaaaaaattagaaaaaatgccggcgagt
gagcgagcaaaaatcgtaaaagaactaagaaaacagatgcttgaagcggctaagaatttg
gaatttgaaaaagctgcggctctaagagacgagatagcaaaacttagagagctttaa
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