Campylobacter fetus subsp. fetus 04/554: CFF04554_1267
Help
Entry
CFF04554_1267 CDS
T03330
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cft
Campylobacter fetus subsp. fetus 04/554
Pathway
cft03030
DNA replication
cft03430
Mismatch repair
cft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFF04554_1267 (dnaE)
03430 Mismatch repair
CFF04554_1267 (dnaE)
03440 Homologous recombination
CFF04554_1267 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cft03032
]
CFF04554_1267 (dnaE)
03400 DNA repair and recombination proteins [BR:
cft03400
]
CFF04554_1267 (dnaE)
Enzymes [BR:
cft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFF04554_1267 (dnaE)
DNA replication proteins [BR:
cft03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFF04554_1267 (dnaE)
DNA repair and recombination proteins [BR:
cft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFF04554_1267 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AIR79153
LinkDB
All DBs
Position
complement(1251206..1255201)
Genome browser
AA seq
1331 aa
AA seq
DB search
MSDFTHLHLHTEYSLLDGANKIKVLAKRLKELNIKSCAITDHGNMYGALDFYKTMKAEGI
KPIIGLEAYIHNHEDISNKESRQRFHLCLFAKNEVGYQNLMYLSSMSYIKGYYYYPRINK
KLLREHSEGLVCSSACLAGEVNFHLNLSDRNLKRGAGGYESAKRVALEYKDIFGDDFYLE
IMRHGIGDQQRIDDDIIRLSMETGIKLIATNDAHYTTKDSAVAQKIFVYISANKNFDDKV
REQVLSEFYAKSADEMSAIFADMPEVIENTNEIVEKCNLEIKLGDATPPNFKFTQEYAKE
RGIILPHPQNEYDLENDSFLFEYECKQGLEKRLEFIDPSKHQIYKDRLDLEINTINNMKF
PGYMLIVADFINEAKRRGIPVGPGRGSAAGSLVAYALRITDIDPLPYNLLFERFLNPERI
SMPDIDVDFCQNRRGEVIDYVIEKYGEYNVAQVATFGKLLAKGVIRDVARVMGMPYSEAD
AMAKLIPDELGITLKAHKNKKGDMEDGAFEKEPKIGELIAKNDLAKQVWEYSCELEGLNR
NPGMHAAGIVISNEELWKKAPLWKQSNAEAGHYVTQYTKDYLEDVDLIKFDFLGLKTLTV
IDNAKKLIKERFGVDILWEKIDFNDQKTYETIQSGNTLGIFQIESSGMQSLAAKLRPDCF
EDIIAMIALYRPGPLNSGMVDDFIDIKHGKKKIEYAFAALKPILEPTYGVIVYQEQVMQV
VQTVGGFSLGGADLVRRAMSKKKEDEMLHLKTQYLEGAKRNGFDEGKADALFELIMKFAE
YGFNKSHSAAYALITFQTAYLKTYYPAEFMAALLTSEENNIDKIIKYIDEIKRLNIKLLP
PNVNYSVREFSVIQKDGSDSIIYGMAAIKGVGVGAVEDIIKAREDGPFESVDSFISKTDC
TTVNRRVFESLIKSGAFDDFGFTRKMLIHNLETIIENSKRISDIKKNATNSLFSDDDSMS
EISVDLVNIKDEFDKKEILKFEQEILGVYVSGHPLDEYRDKIDKINYTVSSEFENVEDGS
EILVVGKIEDTTTKITKTGKKMAIINILDIHGNIEATAFDEYKKIESMSQNELDEPHAFK
IILNKDGQQFKLKINDIISLDDALYKRFTLKSSKLTDDEVFKFQNYFDTIKHATIKDIPN
LTKESEILIIGKMSHINIRTTKSGMEMAILNIVDISGNSEMIAFDSTSKFIANMSEDEQD
TIYAFKVAPNKDAQSKPIINQIISLDDAKDGNFTLKTNRRRYESRVNEQSASATIIGKLE
VDIDIISLDKQKINYIYQLAHSYHQKNGNKRLLLRITNNYDKEVMIFSTEFIVSDEFKSE
LDAILNEAKAG
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttcacacatttacatttacataccgaatattcattgttagacggtgcaaac
aagataaaagttttagccaaaagattaaaagagctaaatataaaatcatgcgctataacc
gatcacggaaatatgtatggggcgcttgatttttataaaactatgaaagccgagggtata
aaacctatcataggacttgaagcttatatacataatcacgaagatataagcaacaaagag
agtaggcagagatttcacctttgtctatttgctaaaaatgaggtaggatatcaaaatctt
atgtatcttagctcaatgtcgtatataaaaggatattactactatccaagaatcaacaaa
aaacttttaagagaacatagcgaaggtttagtatgcagctctgcatgccttgctggagaa
gtaaatttccatttaaatttgagtgatagaaatttaaaaagaggagccggcggatatgaa
tctgccaaaagagttgctttggaatataaagatatatttggcgatgatttttatcttgag
attatgagacacggtataggtgatcaacaacgaatagatgatgatataatcaggctttct
atggaaaccggtataaaactaatagctacaaacgatgcccattataccacaaaagatagt
gcagtagctcaaaagatatttgtatatatctcagcaaataaaaatttcgatgataaagta
cgagaacaagttctaagcgagttttatgccaaatcggctgatgagatgagcgctattttt
gccgatatgccagaagttatagaaaatacaaacgagatagtagaaaagtgcaatttagaa
ataaaattaggagacgctactccaccaaattttaaatttactcaagaatatgcaaaagag
cgcggtataatcctgcctcatccgcaaaatgaatatgatttagaaaatgatagttttttg
tttgagtatgagtgcaaacaaggacttgaaaaaagactcgagtttatcgatccgtctaag
catcaaatttataaagatagattagatcttgagataaatacgataaataatatgaaattt
ccgggctatatgcttatagtggccgacttcataaacgaagcaaaaagacgaggaattcca
gtaggtcctgggcgtggaagtgcagctggaagccttgtagcttacgctcttcgcattact
gatattgatccgttgccttataacttgctatttgaaagatttttaaatccagagcgtata
agtatgccagatatcgatgtggatttttgccaaaataggcgaggggaagttatagattac
gtcatagaaaagtatggggaatacaacgtcgcccaagtagcaacatttggtaagcttttg
gcaaaaggcgttataagagacgttgcaagagttatgggtatgccatattccgaagcagat
gctatggcaaaacttataccagatgagttgggaattactttaaaagcgcataaaaataaa
aaaggcgatatggaagatggagcgttcgaaaaagagccgaaaataggtgaacttatagca
aaaaatgacttagcaaagcaggtttgggaatattcttgtgagcttgaaggattgaataga
aaccccggaatgcatgctgcaggtattgttataagcaatgaagagttatggaaaaaggct
cctttgtggaaacaaagcaatgccgaagccggtcattatgtaactcaatacacaaaagat
taccttgaagatgttgatcttatcaaatttgacttcttgggacttaaaactctaacagta
atcgataatgcaaaaaaactaattaaagagcgttttggcgtagatattttatgggaaaaa
atagatttcaacgatcaaaaaacttatgaaactattcaaagcggaaatactctgggtata
tttcagatagagtcaagcggtatgcaatctcttgctgcgaagcttagaccggattgtttt
gaagatatcatagctatgatagcgctttatcgtcccggacctttgaattctggaatggtt
gatgattttatagatattaagcacggtaagaaaaagatagaatacgctttcgccgcttta
aaacctatactcgaaccgacgtacggagttatagtttatcaagagcaagttatgcaagtt
gttcaaacagtcggaggatttagccttggaggcgcggatcttgtaaggcgcgctatgagt
aagaaaaaagaagatgaaatgttgcatctcaaaactcagtatttagaaggagcaaaaaga
aacggctttgatgaaggcaaagcagacgcactttttgagcttattatgaaatttgcagag
tatggatttaacaaatcccactcagcggcttatgcgcttataacttttcaaacagcgtat
ttaaaaacatattatccggcagaatttatggctgctttgcttactagcgaagagaacaat
atagataaaattataaaatatatcgatgagataaaaagacttaatataaagctacttcct
ccaaatgtaaattattcggtaagggagtttagtgttatacaaaaagatggaagcgactct
attatatacggcatggcagcgataaaaggcgttggagtaggcgctgtggaagatatcata
aaagctagagaagacggtccttttgaaagcgttgatagctttatatcaaaaacagattgc
acgactgtaaatagacgcgtttttgaatctcttataaaatctggcgcatttgatgacttt
ggttttactagaaagatgctcatacataatctagaaactatcatagaaaactcaaaacgt
atatcggatatcaaaaagaatgctacaaattctctatttagcgatgatgatagtatgagt
gagataagcgttgatcttgttaatatcaaagatgaatttgataaaaaagagatattgaaa
ttcgagcaagagatacttggagtttatgtttcgggtcatccattagacgagtatagagat
aaaatagataagataaattacacagtatcaagtgaatttgaaaatgtagaagatggaagt
gagatattagtagtaggtaagatagaagatacaactacaaagataacaaaaacaggtaaa
aaaatggctatcataaatatccttgatattcatgggaatatagaagctaccgcatttgac
gagtataaaaaaatagaatctatgagtcaaaatgagcttgatgagccacatgcgtttaaa
attattttaaataaagacggtcagcagttcaagctaaaaataaatgacataataagcctt
gatgatgctttatataagagatttacgctgaaatcaagcaagcttacggatgacgaagta
tttaaatttcaaaattattttgatactatcaagcacgctacaataaaagatattccaaat
ttaaccaaagaaagtgaaatacttatcatagggaaaatgagtcatataaatattagaaca
actaaaagcggtatggaaatggctatattaaatatagttgatataagcggtaattccgag
atgatagcttttgattctactagtaaattcatagccaatatgagcgaagatgaacaagat
acaatatacgcttttaaagttgctccaaataaagatgctcagtcaaaacctataataaat
cagatcatcagtcttgatgatgcaaaagatggaaatttcactcttaaaacaaatagaaga
cgatatgagtctagagtgaatgaacaaagcgcctctgctactataataggaaagcttgaa
gttgatatagatattataagtttagataagcaaaaaataaattatatttatcaacttgct
cactcttatcatcaaaaaaatggaaataaaagattattacttagaataactaataattac
gataaagaagtgatgattttcagcactgaatttatcgttagtgatgagttcaaatcagag
ttagatgctatactaaacgaagctaaggcaggctaa
DBGET
integrated database retrieval system
