Campylobacter fetus subsp. fetus 04/554: CFF04554_1284
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Entry
CFF04554_1284 CDS
T03330
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cft
Campylobacter fetus subsp. fetus 04/554
Pathway
cft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFF04554_1284 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cft03019
]
CFF04554_1284 (pnp)
03016 Transfer RNA biogenesis [BR:
cft03016
]
CFF04554_1284 (pnp)
Enzymes [BR:
cft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CFF04554_1284 (pnp)
Messenger RNA biogenesis [BR:
cft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFF04554_1284 (pnp)
Transfer RNA biogenesis [BR:
cft03016
]
Prokaryotic type
tRNA degradation factors
CFF04554_1284 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
AIR79170
LinkDB
All DBs
Position
complement(1276181..1278367)
Genome browser
AA seq
728 aa
AA seq
DB search
MQCSIEVNNQIEIFDLNKVAKQAAGAVLMRVKNTVVLAAVAREDAQVEEDFLPLTVQYIE
KQYAAGRIPGGYVKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVMVLSSDPEVD
LQVVSLNAASVALYLSDIPVNSPVCGVRVGHINGKFVINPSNSELKNSALDLYVAGVKDE
LLMIEMRSLPNEQNEIVPVIAIDPMMDPSLNEGFVSRQKMNEFSEDLMIDAIKLATEAIL
KGSNAYEEAFRNYKKETANLEYKPEIENENVAIYINEFYKEDVKAAINQMAKSERASELS
KIAKQIALSEVAQKEGWDEALISNILGKYKKKLVRTGIIKDKKRADGRGLKDVRPISIET
NILPNAHGSCLFTRGQTQALVVTTLGTDNDAQMSEYLTEKNAVADKFMFNYNFPGFSVGE
ASPLKAPGRRELGHGNLAKRALYPSIDLNSPYSLRVVSEILESNGSSSMASVCGGSLSLR
AAGVETIKLVAGVAMGLVFEGDEHAVLTDIMGLEDHDGDMDFKVAGSKDGITALQMDIKL
GGISLDVLKEALYQAKEARDHILNLMVKADEEIVVNEDVLPKLELFSVDPSKIVDIIGQA
GKTIKEIIEKFGVSIDLDRDKGEVKIAGGERQKVEAAKDYIIQITQKEQRSGGFRNKREY
KNVTPFNIGDEFEGEIKKMAAFGAFISLRDGVDGLLHISKIVSPLKEGDTIKVKVSDIKG
GKISLDLN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgttcaatagaagtaaataatcaaattgaaatttttgatcttaataaggttgcc
aaacaagcagccggcgcagtgttaatgcgtgtaaaaaatacagttgtattagccgcggtt
gctagagaagatgctcaagtagaagaggattttttacctcttaccgtgcagtatatagaa
aaacaatacgctgctggtagaataccaggaggatatgtcaaaagagagactaaaccagga
gattttgagacattaacaagccgtattatagatagaagtttaagacctttattccctaaa
ggctatgcatatccgactcagattgtcgtaatggttttaagtagcgatccagaagtggat
ttgcaagtagtgtcgctaaatgctgcgagtgtagctttatatcttagtgatattccggtt
aacagtccggtttgcggtgttagggtagggcatataaacggtaaatttgttataaatcca
agcaattcagagctaaaaaactctgctcttgatctttacgtggcaggcgtaaaagatgaa
cttcttatgatagaaatgagaagtttacccaatgaacaaaatgaaattgtaccagtcatc
gctatagatcctatgatggatcctagtttaaatgaaggtttcgtttcaagacaaaaaatg
aatgaatttagtgaagatcttatgatagatgctataaaattagctacagaagctatattg
aaaggaagcaacgcatatgaagaggcgtttcgtaactacaaaaaagagactgcaaattta
gagtacaagccagagatagaaaatgaaaatgttgcgatatacataaatgaattttacaaa
gaagatgtaaaagcggctataaatcaaatggctaaaagcgaaagagcgagtgagctttct
aaaatagctaaacaaatagctcttagtgaagttgctcaaaaagagggctgggatgaagct
cttatctcgaatatacttggaaaatataagaaaaagttagttagaacaggtattataaaa
gataaaaaaagagccgacggaagaggtctaaaagatgttaggccgatcagtatagagacg
aatattttgccaaatgcacatggaagttgtctatttacccgcggtcaaactcaagctctt
gttgtaactactttaggtactgataatgatgctcaaatgagtgagtacttgacagaaaaa
aatgcagttgccgataaatttatgtttaattataattttcctggatttagcgtaggcgag
gcaagtcctttaaaggctcctggacgacgcgagttaggacatggaaatttagcaaaaaga
gctctttatccaagtatagatttaaatagtccgtactcgttaagagttgttagcgaaatt
ttagaaagtaacggttcaagttctatggctagtgtatgtggcggctctttgtcacttaga
gcagcaggagtcgaaacgatcaagcttgtagccggagtagcgatggggcttgtatttgaa
ggtgatgagcacgctgttttaacagatataatggggcttgaagaccacgatggagatatg
gacttcaaggtcgcaggctcaaaagacggcatcaccgctcttcagatggatatcaaatta
ggtggaattagtttagatgtattaaaagaagcgctataccaagcaaaagaagctagagat
catattttaaatttaatggttaaagcagatgaagaaatagtcgtgaatgaggatgtttta
ccaaagttagagttatttagcgtagatcctagtaaaatagttgatataataggacaggcc
ggaaaaaccataaaagagattatagaaaaatttggagttagcatagatcttgacagagat
aaaggcgaagtaaagatagccgggggagagagacaaaaggtagaagctgctaaagattat
attatacaaattacgcaaaaagagcagagaagcggcggttttaggaacaaaagagagtat
aaaaacgtaactccttttaacataggtgatgagtttgaaggcgaaattaaaaaaatggct
gcttttggcgcatttatatctttaagagatggagttgacgggcttttacatatttcaaaa
atagtttcacctttaaaagagggtgatacgataaaggtaaaagtttcagatattaaaggc
ggaaaaatatcattggatcttaattaa
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