Campylobacter fetus subsp. fetus 04/554: CFF04554_1721
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Entry
CFF04554_1721 CDS
T03330
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III (exonuclease III)
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cft
Campylobacter fetus subsp. fetus 04/554
Pathway
cft03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFF04554_1721 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cft03400
]
CFF04554_1721 (xth)
Enzymes [BR:
cft01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CFF04554_1721 (xth)
DNA repair and recombination proteins [BR:
cft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CFF04554_1721 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AIR79569
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All DBs
Position
complement(1709522..1710280)
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AA seq
252 aa
AA seq
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MKLISWNVNGLRAALGKESFSWLDEHKPDFLALQEIKVSEDKIPAEIYNLGFENISANSA
KRPGYSGVMSLSNLKSQNLKSQFFDDDEGRVLEHKFNNIHLFNIYFPNGQSGDERLAYKM
DFYDKFLSYINALVSEGKGVIFCGDVNTAHREIDLKNPKANSKTSGFLPIERAWIDRVID
SGFIDTFRFINGDKENAYSWWSYRFNARAKNVGWRIDYFFISSNLKDKLKDAFILDSIEG
SDHCPVGIEIDL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactaatttcgtggaacgtaaatggacttagagcagcgcttggaaaagagtctttt
tcgtggctagatgagcataaaccggactttttagctttgcaagagatcaaagtaagtgaa
gataagataccagcagaaatttataatctgggatttgaaaatatatccgcaaattcagcc
aaaagacctggctactcaggtgtgatgagtttgtcgaatttaaaatctcaaaatttaaaa
tcacagttttttgatgatgatgaaggcagagttttggaacataaatttaataatatacat
cttttcaatatatactttccaaacggtcaaagcggagatgaaagactagcatataagatg
gatttttatgacaaatttctatcttatatcaatgctttggtgagcgaaggcaaaggagtg
atattttgcggcgacgtaaataccgctcaccgtgaaatcgaccttaaaaatccaaaagcc
aactccaaaacaagcggatttttgcctattgaaagggcgtggatagatagggttatcgat
agcggatttatagatacttttagatttataaatggcgacaaagagaacgcttactcatgg
tggagctatagatttaacgcaagagctaaaaacgtcggttggcggattgattattttttc
attagctcaaatttaaaagataaactaaaagacgcctttatacttgatagcatagaaggt
agcgatcactgtccagtgggtatcgagatagatctgtaa
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